Table 1.

Discovery stage to identify SNPs associated with choroidal thickness

SNP	CHR	Position	Effect allele	EAF	Nearby genes	Discovery stage			Replication stage			Meta-analysis
						N	β	P	N	β	P	N	β	P
rs3753394	1	196620917	C	0.487	CFH (nearby)	3,418	11.84	2.44 × 10−8	—	—	—	—	—	—
rs800292	1	196642233	A	0.406	CFH (in gene)	3,418	11.55	8.43 × 10−8	2,692	8.61	4.37 × 10−4	6,110	10.27	2.05 × 10−10
rs7782658	7	158858007	A	0.307	VIPR2 (in gene)	3,418	11.59	4.03 × 10−7	—	—	—	—	—	—
rs3793217	7	158848821	G	0.213	VIPR2 (in gene)	3,418	12.46	1.28 × 10−6	2,692	7.69	7.58 × 10−3	6,110	10.34	6.75 × 10−8

CHR, chromosome; EAF, effect allele frequency in the discovery stage.