Table 2. Melting temperatures of DNA 3WJs and the DNA mixture in the absence and presence of NiII ions a .
Metal-free b | 1 eq. of NiII |
||
T m/°C | T m/°C | ΔTm/°C | |
Three-way junctions | |||
L1L2L3 | 51.7 ± 0.3 | 70.5 ± 0.4 | +18.8 |
S1S2S3 | 42.1 ± 0.3 | 42.6 ± 0.5 | +0.5 |
S4S5S6 | 43.3 ± 0.5 | 43.0 ± 0.4 | –0.3 |
Mixture of six strands | |||
L1, L2, L3, S4, S5, and S6 | 62.5 ± 0.3 | 43.7 ± 0.7 | –18.8 |
69.3 ± 0.6 | +6.8 |
aAverage of at least 3 runs after annealing. Standard errors are also listed.
bIn the presence of 10 equiv. of EDTA.