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. 2018 Jun 18;13(6):e0199048. doi: 10.1371/journal.pone.0199048

Table 2. Likelihood of presenting a specific clinical diagnosis for patients carrying p.(Cys759Phe) variant based on their genotype.

Diagnosis Category A: p.(Cys759Phe) Homozygous Category B: Compound Heterozygous p.(Cys759Phe) +USH2A missense Category C: Compound Heterozygous p.(Cys759Phe) +USH2A truncating Category A vs Category B Category A vs Category C Category B vs Category C
N % N % N % likelihood of presenting Usher II diagnosis (p value, two-tailed Fisher´s test)
Usher syndrome type II 0 0 0 0 8 25.8 NA 0.043 0.043
ARRP/SRP 9 64.3 9 64.3 19 61.3
RP+hypoacusis 5 35.7 5 35.7 4 12.9
Total 14 100 14 100 31 100

Fifty-nine cases belonging to 52 families were included in the analysis (4 families having causative mutations in other RP genes and presenting only the Cys759Phe allele in USH2A were excluded; also the proband of the family RP-2424, since only molecular information was available).

To facilitate the comprehension of the genotype-phenotype correlation analysis, the patients were classified into three different categories: homozygous patients for p.(Cys759Phe) variant (Category A); compound heterozygous patients carrying additionally other USH2A variant (missense, Category B and truncating, Category C).

The likelihood of presenting an USH2 diagnosis for each category was calculated by two-tailed Fisher´s test.

Abbreviations: RP, Retinitis Pigmentosa; AR, autosomal recessive; S, sporadic; NA, non applicable.