Table 2. Likelihood of presenting a specific clinical diagnosis for patients carrying p.(Cys759Phe) variant based on their genotype.
Diagnosis | Category A: p.(Cys759Phe) Homozygous | Category B: Compound Heterozygous p.(Cys759Phe) +USH2A missense | Category C: Compound Heterozygous p.(Cys759Phe) +USH2A truncating | Category A vs Category B | Category A vs Category C | Category B vs Category C | |||
---|---|---|---|---|---|---|---|---|---|
N | % | N | % | N | % | likelihood of presenting Usher II diagnosis (p value, two-tailed Fisher´s test) | |||
Usher syndrome type II | 0 | 0 | 0 | 0 | 8 | 25.8 | NA | 0.043 | 0.043 |
ARRP/SRP | 9 | 64.3 | 9 | 64.3 | 19 | 61.3 | |||
RP+hypoacusis | 5 | 35.7 | 5 | 35.7 | 4 | 12.9 | |||
Total | 14 | 100 | 14 | 100 | 31 | 100 |
Fifty-nine cases belonging to 52 families were included in the analysis (4 families having causative mutations in other RP genes and presenting only the Cys759Phe allele in USH2A were excluded; also the proband of the family RP-2424, since only molecular information was available).
To facilitate the comprehension of the genotype-phenotype correlation analysis, the patients were classified into three different categories: homozygous patients for p.(Cys759Phe) variant (Category A); compound heterozygous patients carrying additionally other USH2A variant (missense, Category B and truncating, Category C).
The likelihood of presenting an USH2 diagnosis for each category was calculated by two-tailed Fisher´s test.
Abbreviations: RP, Retinitis Pigmentosa; AR, autosomal recessive; S, sporadic; NA, non applicable.