Table 1.
List of genes differentially expressed between BCGΔBCG1419c and BCG wild type in 10-days old pellicles.
Category | Gene | Product or Rv homologous gene | Fold change BCGΔBCG1419c vs. BCG wild type |
---|---|---|---|
Mycolic acid synthesis | BCG3487c | groEL1 | 0.388 |
BCG2262 | kasA | 0.524 | |
BCG2545c | fas | 0.540 | |
BCG2260 | fabD | 0.554 | |
BCG2261 | acpM | 0.570 | |
BCG2263 | kasB | 0.610 | |
Arginine synthesis | BCG1696 | argR | 0.404 |
BCG1694 | argD | 0.449 | |
BCG1693 | argB | 0.454 | |
BCG1697 | argG | 0.488 | |
BCG1695 | argF | 0.506 | |
BCG1692 | argJ | 0.516 | |
BCG1698 | argH | 0.516 | |
BCG1691 | argC | 0.649 | |
DosR-regulon | BCG0114 | Rv0081 | 0.567 |
BCG0116 | Rv0083 | 0.585 | |
BCG2049c | Rv2030 | 0.632 | |
BCG2050c | hspX | 0.659 | |
Others | BCG0479 | groEL2 | 0.342 |
BCG3488c | groES | 0.470 | |
BCG1630c | Rv1592c | 0.524 | |
BCG1045c | Rv0990c | 0.573 | |
BCG2265 | Rv2248 | 0.609 | |
BCG2547 | Rv2526 | 0.616 | |
BCG0118 | Rv0085 | 0.661 | |
BCG2267c | glpD1 | 0.667 | |
BCG0798 | Rv0748 | 0.669 | |
BCG3904 | bfrB | 1.665 | |
BCG0559c | Rv0516c | 1.712 | |
BCG1421 | Rv1359 | 1.900 | |
BCG1418c | Rv1356c | 1.999 | |
BCG1420 | Rv1358 | 5.706 |
All genes have greater than 1.5-fold change and Benjamini–Hochberg-adjusted p-value < 0.01.