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. 2018 Jun 19;19:475. doi: 10.1186/s12864-018-4836-1

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© The Author(s). 2018

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 7 — REP secondary structures and distribution. a Phylogenetic tree with subclass annotations. b REP sequences annotated by manual inspection: red rectangles, REP sequences also found by automatic annotation and violet rectangles, REP sequences missed by automatic annotation. c Schematic representation of REP sequences found by automatic annotation, only the more frequent REP sequence family is reported for each REPtron. d Histogram of the number of REP sequences families per REPtron. e Distinguishable REP sequence secondary structure types