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. 2018 Jun 18;84(13):e00333-18. doi: 10.1128/AEM.00333-18

TABLE 3.

Summary of measurement methods for environmental parameters

Measured parameter Abbreviation Unit Method, instrument, or source for measurement Reference(s)
Salinity ppt Measured in situ using water quality sonde
Temperature °C Measured in situ using water quality sonde
pH Measured in situ using water quality sonde
Dissolved oxygen DO mg/liter Measured in situ using water quality sonde
Turbidity NTU Measured in situ using water quality sonde
Total suspended solids TSS mg/liter Dry mass captured by filtering 200 ml of sample water through 0.7-μm glass fiber filters 3
Extracted chlorophyll a μg C/liter Fluorometric measurement using acetone extract 94
Particulate organic carbon POC μg C/liter Costech ECS 4010 analyzer 36
Particulate nitrogen PN μg N/liter Costech ECS 4010 analyzer 36
Dissolved organic carbon DOC mg C/liter Shimadzu TOC 5000-A 36
Dissolved inorganic carbon DIC mg C/liter Shimadzu TOC 5000-A 95
Nitrate/nitrite NO3/NO2 μg N/liter Lachat QuikChem 8000 automated ion analyzer 36
Ammonium NH4 μg N/liter Lachat QuikChem 8000 automated ion analyzer 36
Dissolved organic nitrogen DON μg N/liter Lachat QuikChem 8000 automated ion analyzer 34
Dissolved inorganic nitrogen DIN μg N/liter Sum of NO3/NO2 and NH4 34
Total dissolved nitrogen TDN μg N/liter Lachat QuikChem 8000 automated ion analyzer 34
Carbon-to-nitrogen molar ratio C:N Ratio of POC to PN 36
Phosphate PO4 μg P/liter Lachat QuikChem 8000 automated ion analyzer 34
Silicate SiO4 μM Lachat QuikChem 8000 automated ion analyzer 96
Primary productivity PPR mg C/m3/h Light/dark [14C]bicarbonate incorporation 97, 98
River discharge m/s Daily avg from USGS gauging station 02089500 at Ft. Barnwell, 30 km upstream from the head of the NRE
Rainfall cm Daily sum from NWS station at New Bern, NC, airport
Daily avg wind speed m/s Daily avg from NWS station at New Bern, NC, airport
Phytoplankton photopigments μg/liter HPLCa 41
a

HPLC, high-pressure liquid chromatography.