Table 2.

Alignments and characterization of predicted novel macaque miRNA sequences. A comparison of novel macaque sequences were aligned to known human miRNAs identified through NCBI BLAST and miRBase.

Differentially Expressed Macaque Placenta miRNAs
Mature miRNA ID	Fold Change	Mature miRNA ID	Fold Change
preferentially expressed in first trimester placentas
miR-novel_chr7_29993	25.273	miR-431-5p	3.379
miR-200a-3p	19.035	miR-758-3p	3.377
miR-371-5p (mir-371-2)	14.551	miR-novel_chr7_29335	3.364
miR-371-5p (mir-371-1)	14.551	miR-432-5p	3.319
miR-149-5p	11.984	miR-654-3p	3.256
miR-376a-3p (mir-376a-2)	11.704	miR-500a-3p	3.203
miR-376a-3p (mir-376a-1)	11.704	miR-423-3p	3.139
miR-novel-chr3_22946	9.803	miR-494-3p	3.088
miR-novel-chr6_28791	9.785	miR-127-5p	3.061
miR-519a-3p	9.701	miR-1304-5p	3.018
miR-novel-chr17_14750	8.111	miR-512-3p	3.001
miR-novel-chr16_12432	8.000	miR-199a-3p	3.002
miR-934-3p	7.946	miR-novel_chr2_19386	2.949
miR-novel-chr20_20305	7.872	miR-382-5p	2.939
miR-372-3p	7.391	miR-500b-3p	2.930
miR-363-3p	6.894	miR-498-5p	2.887
miR-novel-chr20_20700	6.644	miR-323b-3p	2.869
miR-934-5p	6.525	miR-412-5p	2.859
miR-134-5p	6.468	miR-379-5p	2.752
miR-370-3p	6.253	miR-379-3p	2.682
miR-novel-chr14_10594	6.176	miR-502-3p	2.675
miR-767-5p	6.063	miR-novel_chr9_33875	2.667
miR-105-5p (mir-105-2)	5.731	miR-novel-chr4_23841	2.636
miR-105-5p (mir-105-1)	5.731	miR-146b-5p	2.608
miR-92a-3p	5.512	miR-371-3p (mir-371-2)	2.558
miR-novel-chr14_9559	5.241	miR-371-3p (mir-371-1)	2.558
miR-335-3p	4.928	miR-518a-3p (mir-518a-4)	2.555
miR-20b-5p	4.926	miR-518a-3p (mir-518a-3)	2.555
miR-224-5p	4.786	miR-518a-3p (mir-518a-1)	2.555
miR-373-3p	4.776	miR-18a-3p	2.532
miR-novel-chr2_17643	4.649	miR-130a-5p	2.476
miR-493-5p	4.616	miR-6529-5p	2.458
miR-127-3p	4.542	miR-374b-3p	2.458
miR-130b-5p	4.532	miR-378d-3p	2.385
miR-92a-3p	4.436	miR-181b-5p	2.381
miR-novel-chr4_24700	4.424	miR-25-3p	2.380
miR-296-3p	4.341	miR-421-3p	2.369
miR-novel_chr18_15544	4.284	miR-181b-5p	2.365
miR-512-5p	4.182	miR-767-3p	2.358
miR-183-5p	4.124	miR-31-5p	2.354
miR-novel_chrx_36251	4.079	miR-520a-3p	2.350
miR-378a	4.043	miR-96-5p	2.337
miR-409-3p	3.951	miR-455-3p	2.321
miR-323a-3p	3.939	miR-411-3p	2.304
miR-519b -3p	3.896	miR-433-3p	2.294
miR-200a-5p	3.849	miR-518a-3p (mir-518a-2)	2.265
miR-novel_chr2_17707	3.848	miR-627-5p	2.241
miR-novel_chr2_18874	3.848	miR-1262-3p	2.235
miR-299-3p	3.832	miR-576-3p	2.222
miR-543-3p	3.777	miR-192-5p	2.198
miR-520a-5p	3.771	miR-501-3p	2.192
miR-374b-5p	3.771	miR-novel_chr9_33918	2.186
miR-654-5p	3.763	miR-452-5p	2.148
miR-519c-3p	3.760	miR-429-3p	2.133
miR-214-3p	3.670	miR-92b-3p	2.114
miR-205-5p	3.641	miR-novel_chr20_20617	2.111
miR-novel_chr19_16465	3.630	miR-342-3p	2.089
miR-182-5p	3.615	miR-197-3p	2.086
miR-novel_chr19_17320	3.609	miR-novel-chr1_609	2.080
miR-17-5p	3.570	miR-novel_chr11_6393	2.075
miR-769-5p	3.556	miR-214-5p	2.068
miR-novel-chr9_34426	3.523	miR-93-5p	2.052
miR-942-5p	3.507	miR-199a-5p (mir-199a-2)	2.047
miR-novel_chr1_123	3.495	miR-199a-5p (mir-199a-1)	2.047
miR-493-3p	3.434	miR-375-3p	2.022
miR-20a-5p	3.428	miR-576-5p	2.017
miR-novel-chr19_17336	3.423	miR-7189-3p	2
miR-106a-5p	3.415	miR-154-3p	2
miR-1180-3p	3.391
preferentially expressed in term placentas
miR-184-3p	12.091	miR-23a-3p	2.519
miR-139-5p	6.329	miR-486-5p	2.466
miR-125b-5p (mir-125b-2)	5.130	miR-521-3p	2.428
miR-125b-5p (mir-125b-1)	5.109	miR-101-3p	2.412
miR-29a-3p	4.079	miR-29b-3p (mir-29b-2)	2.400
miR-100-5p	3.382	miR-29b-3p (mir-29b-1)	2.393
miR-451-5p	3.232	let7a-5p (mir-let-7a-1)	2.337
miR-146a-5p	3.210	let7a-5p (mir-let-7a-2)	2.328
miR-181a-5p (mir-181a-2)	2.999	miR-101-3p	2.326
miR-181a-5p (mir-181a-1)	2.999	let7a-5p (mir-let-7a-3)	2.310
miR-27a-3p	2.844	miR-novel_chr6_28865	2.267
miR-24-3p (mir-24-2)	2.732	miR-novel_chr4_23810	2.178
miR-24-3p (mir-24-1)	2.721	miR-518c-3p	2.103
miR-142-5p	2.719	miR-518d-3p	2.078
miR-542-3p	2.573

Blue= C14MC miRNAs, Orange= C19MC miRNAs, Green= miR-371-3 miRNAs. Parenthesis denote the miRNA precursor variant.