Skip to main content
. 2018 Jun 19;11:167. doi: 10.1186/s13068-018-1162-4

Table 1.

Statistics and general features of the Bathyarchaeota MAGs ATB-1, -2, -3, -4, and -5 analyzed in this study

Metagenome-assembled genome ATB-1 ATB-2 ATB-3 ATB-4 ATB-5
Origin Thermophilic biogas reactor system (55 °C) Mesophilic biogas reactor system (37 °C)
Digestate of system 1 AF of system 3 AF of system 3 AF of system 3 AF of system 2
Cellulolytic/hydrolytic biofilm Methanogenic biofilm Methanogenic biofilm Methanogenic biofilm Methanogenic biofilm
Total length [bp] 2,038,732 1,574,857 1,495,994 1,083,171 1,914,325
Number of contigs 152 59 131 168 184
Largest contig 78,618 181,661 47,427 28,450 85,214
N50 18,903 37,126 13,707 8072 19,864
GC content [%] 48.45 45.80 45.36 48.94 42.17
Protein-coding genes 2279 1685 1709 1294 2042
Hypothetical proteins 873 597 671 501 832
rRNA genes 3 (16S-23S-5S) n.d. n.d. n.d. n.d.
tRNA genes 39 34 22 15 27
Completenessa 88.79 92.06 82.28 64.83 86.30
Contaminationa 5.61 4.28 3.74 4.43 5.14

AF anaerobic filter, n.d. not determined

aCompleteness and contamination were estimated by [25]