Table 2. Overview of sequence coverage for each genetic marker (COI, ITS2, 16S rDNA, 28S rDNA) and respective clade, as well as the combination of COI and ITS2 (used in the STACEY analysis), and the combination including specimens with at least three out of the four genetic markers (CONCAT).
Clade number | Number of specimens | COI | ITS2 | COI and ITS2 | 16S rDNA | 28S rDNA | CONCAT |
---|---|---|---|---|---|---|---|
1 | 82 | 63 | 63 | 44 | 3 | 5 | 5 |
2 | 36 | 32 | 28 | 24 | 3 | 4 | 4 |
3 | 57 | 50 | 55 | 48 | 4 | 5 | 5 |
4 | 14 | 14 | 13 | 13 | 4 | 4 | 4 |
5 | 19 | 19 | 18 | 18 | 4 | 4 | 4 |
6 | 36 | 33 | 25 | 22 | 2 | 4 | 4 |
7 | 12 | 12 | 6 | 6 | 4 | 5 | 5 |
8 | 41 | 40 | 29 | 28 | 3 | 3 | 3 |
9 | 3 | 2 | 2 | 1 | 2 | 2 | 2 |
10 | 12 | 12 | 7 | 7 | 3 | 3 | 3 |
11 | 5 | 5 | 3 | 3 | 3 | 3 | 3 |
12 | 23 | 23 | 17 | 17 | 3 | 6 | 6 |
13 | 27 | 26 | 25 | 24 | 3 | 5 | 5 |
14 | 20 | 18 | 19 | 17 | 3 | 4 | 4 |
15 | 18 | 15 | 16 | 13 | 3 | 4 | 4 |
16 | 62 | 55 | 50 | 43 | 6 | 6 | 8 |
17 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
18 | 3 | 3 | 2 | 2 | 2 | 2 | 2 |
19 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
20 | 2 | 2 | 2 | 2 | 2 | 2 | 2 |
21 | 18 | 18 | 2 | 2 | 1 | 1 | 1 |
22 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
23 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
24 | 6 | 5 | 4 | 3 | 4 | 3 | 4 |
25 | 4 | 4 | 3 | 3 | 2 | 2 | 2 |
26 | 3 | 1 | 3 | 1 | 2 | 2 | 2 |
27 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
28 | 5 | 5 | 5 | 5 | 4 | 2 | 4 |
513 | 462 | 402 | 351 | 75 | 86 | 91 |