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. 2018 Jun 20;13(6):e0198356. doi: 10.1371/journal.pone.0198356

Table 3. Summary of haplotype and distance analyses for COI, with specification of excluded sequences, alignment length, number of haplotypes, and uncorrected intra- and interspecific distances.

Species number to which the species is compared with, for the minimum and maximum interspecific distances, in parentheses.

Species number Number of specimens Removed sequences in haplotype analysis Original alignment length Pruned alignment length Number of haplotypes Uncorrected
intraspecific distance
Minimum uncorrected interspecific distance (%) Maximum uncorrected interspecific distance (%)
1 63 658 555 12 0–1.9 15.6–17.7 (7) 17.4–20.3 (8)
2 32 658 569 25 0–2.4 13.9–16.0 (3) 19.6–21.5 (21)
3 50 658 615 44 0–2.3 13.9–16.0 (2) 20.1–22.4 (21)
4 14 658 615 7 0–1.0 9.9–10,7 (26) 20.9–22.7 (10)
5 19 658 600 10 0–1.1 12.3–14.0 (16) 19.6–21.6 (15)
6 33 1314_6 658 609 10 0–0.8 8.8–10.8 (7) 19.2–20.4 (27)
7 12 658 627 8 0–0.6 8.8–10.8 (6) 19.2–20.9 (4)
8 40 1203_8 658 612 33 0–3.1 10.5–12.8 (7) 19.1–21.5 (15)
9 2 649 603 2 0.2 11.2–12.1 (7) 20.5–21.9 (4)
10 12 658 593 4 0–1.9 11.5–12.9 (11) 20.9–22.7 (4)
11 5 630 615 4 0–1.1 11.5–12.9 (10) 19.5–19.7 (26)
12 23 658 606 16 0–1.3 8.2–9.7 (13) 19.1–20.5 (2)
13 26 1959_13 658 597 14 0–1.9 8.2–9.7 (12) 19.5–21.3 (15)
14 18 658 615 5 0–0.3 16.0–17.4 (1) 20.1–21.1 (24)
15 15 658 567 4 0–0.5 17.2–18.6 (6) 19.5–21.8 (16)
16 55 2325_16 658 579 48 0–2.4 12.3–14.0 (5) 19.5–21.8 (15)
17 1 NA NA 1 NA 14.6–15.6 (6) 20.6–21.4 (20)
18 3 627 624 3 0.5–0.6 13.0–14.3 (10) 20.7–21.4 (4)
19 1 NA NA 1 NA 12.1–12.5 (10) 19.6–20.8 (3)
20/28 7 630 621 2 0–3.4 12.1–13.2 (21) 20.4–22.0 (22)
21 18 658 585 2 0–0.3 12.0–13.2 (20) 20.1–22.4 (3)
22 1 NA NA 1 NA 13.1–13.6 (25) 20.4–22.0 (20)
23 1 NA NA 1 NA 17.4–18.9 (16) 22.9 (24)
24 5 618 510 2 0–0.02 16.0–17.1 (25) 22.9 (23)
25 4 624 567 2 0–0.8 13.1–13.6 (22) 20.7–21.7 (23)
26 1 NA NA 1 NA 9.9–10.7 (4) 22.1 (23)
27 1 NA NA 1 NA 11.1–12.3 (4) 20.7–21.8 (10)