Table 2.
OTUs with best hits/match reference
| OTU | Best match name | Best match accession | Length of match | Bits score | e‐score | Identity | % Similarity |
|---|---|---|---|---|---|---|---|
| 1 | Kamiti River virus | DQ335465.1 | 124 | 178 (90) | 5.00E‐44 | 106/110 (96%) | 96.00 |
| 2 | Cell fusing agent virus | EU074056.1 | 229 | 190 (96) | 9.00E‐48 | 99/100 (99%) | 99.00 |
| 3 | Flavivirus CbaAr4001 | DQ232622.1 | 87 | 155 (78) | 5.00E‐37 | 84/86 (97%) | 97.67 |
| 4 | West Nile virus | GU246670.1 | 186 | 46.1 (23) | 2.00E‐04 | 26/27 (96%) | 57.81 |
| 5 | Meaban‐like virus | KJ440090.1 | 124 | 48.1 (24) | 6.00E‐05 | 24/24 (100%) | 52.00 |
| 6 | Dengue 2 virus | FJ392598.1 | 144 | 48.1 (24) | 2.00E‐05 | 24/24 (100%) | 43.04 |
| 7 | Iguape virus | EU074054.1 | 229 | 48.1 (24) | 6.00E‐05 | 24/24 (100%) | 52.17 |
| 8 | Tyuleniy virus | EU074019.1 | 232 | 48.1 (24) | 1.00E‐04 | 24/24 (100) | 52.92 |
| 9 | Usutu virus | KC754958.1 | 10,745 | 44.1 (22) | 1.00E‐03 | 22/22 (100%) | 43.93 |
| 10 | Spondweni virus | EU074014.1 | 232 | 44.1 (22) | 1.00E‐03 | 25/26 (96%) | 55.10 |
| West Nile virus | GU246670.1 | 186 | 44.1 (22) | 1.00E‐03 | 25/26 (96%) | 50.00 | |
| 11 | Spondweni virus | EU074014.1 | 232 | 44.1 (22) | 1.00E‐03 | 25/26 (96%) | 53.12 |
| West Nile virus | GU246670.1 | 186 | 44.1 (22) | 1.00E‐03 | 25/26 (96%) | 53.12 | |
| St Louis encephalitis virus | JQ957871.1 | 2,718 | 44.1 (22) | 1.00E‐03 | 25/26 (96%) | 45.56 | |
| Ilheus virus | EU073990.1 | 232 | 44.1 (22) | 1.00E‐03 | 25/26 (96%) | 46.94 | |
| 12 | Mosquito flavivirus | HQ676625.1 | 165 | 44.1 (22) | 4.00E‐03 | 24/25 (96%) | 44.87 |
| Phlebotomus flavivirus | FJ817076.1 | 157 | 42.1 (21) | 4.00E‐03 | 24/25 (96%) | 48.15 | |
| 13 | Mosquito flavivirus | HQ676625.1 | 165 | 42.1 (21) | 4.00E‐03 | 24/25 (96%) | 96.97 |
| Kamiti River virus | DQ335465.1 | 124 | 63.9 (32) | 1.00E+09 | 32/32 (100%) | 80.95 | |
| Flavivirus CbaAr4001 | DQ232622.1 | 87 | 63.9 (32) | 1.00E‐09 | 32/32 (100%) | 59.49 | |
| 14 | Mosquito flavivirus | HQ676625.1 | 165 | 42.(21) | 4.00E‐03 | 24/25 (96%) | 47.95 |
| Phlebotomus virus | FJ817076.1 | 157 | 42.1 (21) | 4.00E‐03 | 24/25 (96%) | 49.37 | |
| 15 | Louping ill‐like virus | NC_001809.1 | 10,871 | 40.1 (20) | 2.80E‐02 | 20/20 (100%) | 45.70 |
| 16 | Japanese encephalitis virus | HQ223287.1 | 10,296 | 38.2 (19) | 5.10E‐02 | 25/27 (92%) | 50.72 |
| Edge Hill virus | AF275877.1 | 986 | 38.2 (19) | 5.10E‐02 | 25/27 (92%) | 50.72 | |
| 17 | Marisma virus | JN603190.1 | 1,008 | 44.1 (22) | 1.00E‐03 | 22/24 (100%) | 50.00 |
| 18 | Kokobera virus | NC_009029.2 | 10,874 | 42.1 (21) | 5.00E‐03 | 21/21 (100%) | 42.39 |
| Tick‐borne encephalitis virus | KT224352.1 | 10,619 | 42.1 (21) | 5.00E‐03 | 21/21 (100%) | 45.75 | |
| Dengue 2 virus | FJ392595.1 | 144 | 42.1 (21) | 5.00E‐03 | 21/21 (100%) | 37.11 | |
| 19 | Murray Valley encephalitis virus | KF751870.1 | 11,012 | 32.2 (16) | 3.60E+00 | 19/20 (95%) | 57.79 |
| St Louis encephalitis virus | JQ957871 | 2,718 | 32.2 (16) | 3.60E+00 | 19/20 (95%) | 49.35 | |
| Dengue 2 virus | FJ392598.1 | 144 | 32.2 (16) | 3.60E+00 | 19/20 (95%) | 42.86 | |
| 20 | Ochlerotatus caspius flavivirus‐like virus | HF548540 | 9,839 | 34.2 (17) | 8.80E‐01 | 17/17 (100%) | 43.42 |
| 21 | Hepatitis C virus | JQ060123.1 | 336 | 32.2 (16) | 3.30E+00 | 16/16 (100%) | 41.67 |
| Dengue 1 virus | M87512.1 | 10,717 | 32.2 (16) | 3.30E+00 | 16/16 (100%) | 52.11 | |
| Usutu virus | NC_006551.1 | 11,066 | 32.2 (16) | 3.30E+00 | 16/16 (100%) | 45.33 | |
| West Nile virus | KX547594.1 | 10,787 | 32.2 (16) | 3.30E+00 | 16/16 (100%) | 49.33 | |
| Japanese encephalitis virus | KM658163.1 | 10,965 | 32.2 (16) | 3.30E+00 | 16/16 (100%) | 46.67 | |
| 22 | West Nile virus | GU246670.1 | 186 | 44.1 (22) | 1.00E‐03 | 25/26 (96%) | 61.8 |
| Ngoye virus | EU074038.1 | 232 | 44.1 (22) | 1.00E‐03 | 25/26 (96%) | 50.00 | |
| 23 | West Nile virus | JX041630.1 | 10,810 | 40.1 (20) | 1.40E‐02 | 23/24 (95%) | 50.00 |
| Meaban virus | KJ440090.1 | 124 | 40.1 (20) | 1.40E‐02 | 23/24 (95%) | 51.39 | |
| 24 | Meaban virus | KJ440090.1 | 124 | 40.1 (20) | 1.50E‐02 | 20/20 (100) | 53.33 |
| Iguape virus | AY167441.1 | 2,669 | 40.1 (20) | 1.50E‐02 | 20/20 (100) | 51.35 | |
| 25 | Unidentified flavivirus 1 | – | – | – | – | – | – |
| 26 | Unidentified flavivirus 2 | – | – | – | – | – | – |