Table 2.
SNP | A1/A2b | MAF casesc | MAF controls | Chi square | Odds ratio | P-value | FDR |
---|---|---|---|---|---|---|---|
rs6990313 | A/C | 0.10 | 0.09 | 1.37 | 1.21 | 0.243 | 0.836 |
rs10105409 | G/A | 0.01 | 0.00 | 0.05 | 1.16 | 0.818 | 0.904 |
rs6601604 | A/G | 0.29 | 0.34 | 4.42 | 0.81 | 0.036* | 0.836 |
rs10112596 | A/G | 0.17 | 0.19 | 1.33 | 0.87 | 0.248 | 0.836 |
rs12550668 | A/G | 0.40 | 0.43 | 1.74 | 0.88 | 0.188 | 0.836 |
rs2898292 | G/A | 0.10 | 0.10 | 0.00 | 1.00 | 0.995 | 0.995 |
rs4840579 | G/A | 0.39 | 0.40 | 0.28 | 0.95 | 0.597 | 0.836 |
rs11250159 | A/C | 0.08 | 0.09 | 0.65 | 0.87 | 0.421 | 0.836 |
rs17153694 | A/G | 0.07 | 0.08 | 0.18 | 0.93 | 0.670 | 0.836 |
rs17153698 | A/G | 0.16 | 0.15 | 0.24 | 1.06 | 0.625 | 0.836 |
rs6983129 | C/A | 0.47 | 0.48 | 0.59 | 0.93 | 0.444 | 0.836 |
rs2898295 | A/G | 0.50 | 0.47 | 1.06 | 1.10 | 0.304 | 0.836 |
rs11250163 | C/A | 0.47 | 0.45 | 0.69 | 1.08 | 0.407 | 0.836 |
rs13275657 | A/G | 0.19 | 0.20 | 0.64 | 0.91 | 0.423 | 0.836 |
rs2029969 | G/A | 0.38 | 0.36 | 0.53 | 1.07 | 0.465 | 0.836 |
rs2173117 | A/C | 0.33 | 0.30 | 1.78 | 1.14 | 0.182 | 0.836 |
rs3779664 | A/G | 0.14 | 0.16 | 1.08 | 0.87 | 0.299 | 0.836 |
rs3735814 | A/G | 0.48 | 0.49 | 0.18 | 0.96 | 0.671 | 0.836 |
rs2740434 | A/G | 0.33 | 0.34 | 0.13 | 0.97 | 0.720 | 0.844 |
rs2645399 | A/G | 0.34 | 0.36 | 0.49 | 0.93 | 0.486 | 0.836 |
rs11784693 | A/G | 0.29 | 0.32 | 1.44 | 0.89 | 0.231 | 0.836 |
rs804283 | G/A | 0.29 | 0.31 | 1.24 | 0.89 | 0.265 | 0.836 |
rs17153747 | G/A | 0.13 | 0.12 | 0.75 | 1.13 | 0.386 | 0.836 |
rs804282 | C/A | 0.45 | 0.46 | 0.40 | 0.94 | 0.529 | 0.836 |
rs13264774 | A/G | 0.15 | 0.15 | 0.02 | 1.02 | 0.880 | 0.935 |
rs13273672 | G/A | 0.30 | 0.29 | 0.26 | 1.05 | 0.610 | 0.836 |
rs804280 | C/A | 0.43 | 0.44 | 0.32 | 0.95 | 0.574 | 0.836 |
rs3729856 | G/A | 0.14 | 0.14 | 0.16 | 1.06 | 0.689 | 0.836 |
rs867858 | C/A | 0.31 | 0.31 | 0.05 | 1.02 | 0.824 | 0.904 |
rs1062219 | A/G | 0.45 | 0.46 | 0.20 | 0.96 | 0.655 | 0.836 |
rs804290 | A/G | 0.24 | 0.22 | 1.31 | 1.13 | 0.253 | 0.836 |
rs11785481 | A/G | 0.14 | 0.15 | 0.26 | 0.93 | 0.607 | 0.836 |
rs12458 | T/A | 0.33 | 0.31 | 0.36 | 1.06 | 0.548 | 0.836 |
rs3203358 | C/G | 0.33 | 0.32 | 0.01 | 1.01 | 0.917 | 0.944 |
aN = 534 cases, 413 controls.
bAlleles 1 and 2 refer to minor and major allele, respectively.
cMAF = minor allele frequency.
*P < 0.05.