Table 1.
Predicted peptides from NANOG that bind to the most common HLA-A types.
| Pos | HLA | Peptide | Score | % Rank | BindLevel |
|---|---|---|---|---|---|
| 128 | HLA-A*01:01 | LSNILNLSY | 0.925578 | 0.0772 | ≤SB |
| 288 | HLA-A*01:01 | QTMDLFLNY | 0.876012 | 0.122 | ≤SB |
| 170 | HLA-A*01:01 | SAPTYPSLY | 0.553264 | 0.4238 | ≤SB |
| 275 | HLA-A*01:01 | NVIQQTTRY | 0.402377 | 0.669 | ≤WB |
| 233 | HLA-A*01:01 | NQAWNSPFY | 0.263582 | 1.033 | ≤WB |
| 285 | HLA-A*01:01 | STPQTMDLF | 0.212155 | 1.2491 | ≤WB |
| 27 | HLA-A*01:01 | VICGPEENY | 0.125078 | 1.9183 | ≤WB |
| 131 | HLA-A*02:01 | ILNLSYKQV | 0.236804 | 1.29 | ≤WB |
| 266 | HLA-A*02:01 | ALEAAGEGL | 0.195211 | 1.5189 | ≤WB |
| 124 | HLA-A*02:01 | QMQELSNIL | 0.18792 | 1.5702 | ≤WB |
| 297 | HLA-A*02:01 | SMNMQPEDV | 0.150866 | 1.8894 | ≤WB |
| 147 | HLA-A*03:01 | RMKSKRWQK | 0.726852 | 0.1333 | ≤SB |
| 288 | HLA-A*03:01 | QTMDLFLNY | 0.521822 | 0.3469 | ≤SB |
| 78 | HLA-A*03:01 | TSAEKSVAK | 0.453863 | 0.4542 | ≤SB |
| 160 | HLA-A*03:01 | KNSNGVTQK | 0.229502 | 1.0894 | ≤WB |
| 79 | HLA-A*03:01 | SAEKSVAKK | 0.170143 | 1.3846 | ≤WB |
| 143 | HLA-A*03:01 | FQNQRMKSK | 0.150921 | 1.5158 | ≤WB |
| 129 | HLA-A*03:01 | SNILNLSYK | 0.103267 | 1.9548 | ≤WB |
| 282 | HLA-A*24:02 | RYFSTPQTM | 0.944242 | 0.0464 | ≤SB |
| 135 | HLA-A*24:02 | SYKQVKTWF | 0.808316 | 0.1963 | ≤SB |
| 173 | HLA-A*24:02 | TYPSLYSSY | 0.745947 | 0.2532 | ≤SB |
| 205 | HLA-A*24:02 | TWSNQTQNI | 0.563898 | 0.4686 | ≤SB |
| 285 | HLA-A*24:02 | STPQTMDLF | 0.452306 | 0.6464 | ≤WB |
| 240 | HLA-A*24:02 | FYNCGEESL | 0.356878 | 0.8489 | ≤WB |
| 276 | HLA-A*24:02 | VIQQTTRYF | 0.261095 | 1.1693 | ≤WB |
| 292 | HLA-A*24:02 | LFLNYSMNM | 0.247165 | 1.2256 | ≤WB |
| 218 | HLA-A*24:02 | NHSWNTQTW | 0.233086 | 1.2872 | ≤WB |
| 213 | HLA-A*24:02 | IQSWSNHSW | 0.194124 | 1.4867 | ≤WB |
| 235 | HLA-A*24:02 | AWNSPFYNC | 0.15336 | 1.7525 | ≤WB |
| 157 | HLA-A*24:02 | NWPKNSNGV | 0.129894 | 1.959 | ≤WB |
| 275 | HLA-A*26:01 | NVIQQTTRY | 0.945984 | 0.0055 | ≤SB |
| 288 | HLA-A*26:01 | QTMDLFLNY | 0.925988 | 0.0076 | ≤SB |
| 50 | HLA-A*26:01 | TVSPLPSSM | 0.436104 | 0.2259 | ≤SB |
| 285 | HLA-A*26:01 | STPQTMDLF | 0.420456 | 0.2396 | ≤SB |
| 170 | HLA-A*26:01 | SAPTYPSLY | 0.327707 | 0.3584 | ≤SB |
| 233 | HLA-A*26:01 | NQAWNSPFY | 0.135179 | 0.9734 | ≤WB |
| 49 | HLA-A*26:01 | ETVSPLPSS | 0.12096 | 1.0868 | ≤WB |
| 268 | HLA-A*26:01 | EAAGEGLNV | 0.114943 | 1.1405 | ≤WB |
| 128 | HLA-A*26:01 | LSNILNLSY | 0.100328 | 1.2837 | ≤WB |
| 173 | HLA-A*26:01 | TYPSLYSSY | 0.100053 | 1.2865 | ≤WB |
| 246 | HLA-A*26:01 | ESLQSCMQF | 0.094491 | 1.3466 | ≤WB |
| 276 | HLA-A*26:01 | VIQQTTRYF | 0.078035 | 1.5685 | ≤WB |
| 166 | HLA-A*26:01 | TQKASAPTY | 0.071117 | 1.6778 | ≤WB |
| 169 | HLA-A*26:01 | ASAPTYPSL | 0.059168 | 1.9468 | ≤WB |
Peptide length 9; rank threshold for strong binding peptide 0.500; rank threshold for weak binding peptide 2.000; SB, strong binding; WB, weak binding; predicted peptides were generated using NetMHCpan Version 4.0 (http://www.cbs.dtu.dk/services/NetMHCpan/).