Table 4.
Comparative mapping of tag SNPs with previous QTLs reported in the pig QTL database (as of December 18, 2017) and previous GWAS results.
| SSC1 | SNP ID | Location (bp)2 | QTL location range3 | QTL ID4 | Related QTL | Trait |
|---|---|---|---|---|---|---|
| 1 | DRGA0001676 | 192923645 | 1: 162073157–233806417 | 141 | Daily feed intake | RFI/FCR |
| 1 | ALGA0007029 | 181869453 | 1: 162073157–233806417 | 141 | Daily feed intake | RFI/FCR |
| 1 | H3GA0003349 | 193093994 | 1: 162073157–233806417 | 141 | Daily feed intake | RFI/FCR |
| 1 | DRGA0001684 | 193482814 | 1: 162073157–233806417 | 141 | Daily feed intake | RFI/FCR |
| 1 | MARC0055716 | 193518898 | 1: 162073157–233806417 | 141 | Daily feed intake | RFI/FCR |
| 1 | H3GA0003357 | 193823157 | 1: 162073157–233806417 | 141 | Daily feed intake | RFI/FCR |
| 1 | H3GA0003350 | 193062563 | 1: 162073157–233806417 | 141 | Daily feed intake | RFI/FCR |
| 1 | MARC0080881 | 192844903 | 1: 162073157–233806417 | 141 | Daily feed intake | RFI/FCR |
| 1 | MARC0007670 | 193689396 | 1: 162073157–233806417 | 141 | Daily feed intake | RFI/FCR |
| 1 | MARC0068360 | 191819089 | 1: 162073157–233806417 | 141 | Daily feed intake | RFI/FCR |
| 1 | ALGA0007020 | 191885797 | 1: 162073157–233806417 | 141 | Daily feed intake | RFI/FCR |
| 1 | INRA0005310 | 193837874 | 1: 162073157–233806417 | 141 | Daily feed intake | RFI |
| 1 | WU_10.2_1_188782437 | 188782437 | 1: 162073157–233806417 | 141 | Daily feed intake | RFI |
| 7 | WU_10.2_7_18377044 | 18377044 | 7: 11625414–36993248 | 5916 | Time spent drinking | DFI/RFI |
| 7 | DRGA0007294 | 20439045 | 7: 11625414–36993248 | 5916 | Time spent drinking | DFI |
| 7 | WU_10.2_7_19776357 | 19776357 | 7: 11625414–36993248 | 5916 | Time spent drinking | DFI |
| 7 | WU_10.2_7_18325943 | 18325943 | 7: 11625414–36993248 | 5916 | Time spent drinking | DFI |
| 7 | H3GA0020180 | 20261277 | 7: 11625414–36993248 | 5916 | Time spent drinking | DFI |
| 7 | ASGA0031614 | 20287356 | 7: 11625414–36993248 | 5916 | Time spent drinking | DFI |
| 7 | ASGA0031606 | 20216211 | 7: 11625414–36993248 | 5916 | Time spent drinking | DFI |
| 7 | WU_10.2_7_19752202 | 19752202 | 7: 11625414–36993248 | 5916 | Time spent drinking | DFI |
| 7 | MARC0042115 | 41854212 | 7: 38992356–48448805 | 191 | Average daily gain | NVD |
| 7 | WU_10.2_7_41505385 | 41505385 | 7: 38992356–48448805 | 191 | Average daily gain | NVD |
| 7 | H3GA0021155 | 41720015 | 7: 38992356–48448805 | 191 | Average daily gain | NVD |
| 7 | WU_10.2_7_41803542 | 41803542 | 7: 38992356–48448805 | 191 | Average daily gain | NVD |
| 7 | H3GA0021194 | 42150905 | 7: 38992356–48448805 | 191 | Average daily gain | NVD |
| 13 | ASGA0059147 | 159897035 | 13: 130538722–194995520 | 2884 | Feed conversion ratio | TPD |
| 17 | WU_10.2_17_66292358 | 66292358 | 17: 64337706–66928144 | 3829 | Average daily gain | FCR |
1Sus scrofa chromosome. 2SNP positions in Ensembl. 3Location range of the mapped QTL in the QTL database. 4Identity of QTL in the pig QTL database or published literature.