Table 2. List of genes differentially expressed in Hv_Sym compared to both Hv_Apo and Hv_NC64A (‘A99-specific’).
Fold change of expression level determined by microarray analysis and qPCR analysis
Table 2—source data 1. Expression level of ‘A99-specific’ genes and ‘Symbiosis related’ genes examined by microarray and qPCR.
elife-35122-table2-data1.xlsx (12.4KB, xlsx)
DOI: 10.7554/eLife.35122.010
| Hv_Sym > Hv_Apo, Hv_NC64A | ||||||
|---|---|---|---|---|---|---|
| Probe name (gene ID) | Microarray | qPCR | Gene annotation | InterProScan | ||
| Sym/Apo | Sym/NC64A | Sym/Apo | Sym/NC64A | |||
| rc_13579 | 12.8 | 4.0 | 11.2 | 4.0 | (Hydra specific) | |
| rc_12891 | 9.0 | 2.9 | 14.6 | 6.9 | (Hydra viridis specific) | |
| 27417 | 4.5 | 4.8 | 3.0 | 3.0 | IPR009786 Spot_14 | |
| rc_26218 | 3.3 | 2.4 | 2.5 | 2.3 | sodium-dependent phosphate transport protein |
PTHR10010 Sodium-dependent phosphate transport protein 2C |
| 1046 | 3.1 | 2.1 | 2.2 | 1.6 | glutamine synthetase | |
| Hv_Sym < Hv_Apo, Hv_NC64A | ||||||
| Probe name (gene ID) | Microarray | qPCR | Gene Annotation | InterProScan | ||
| Apo/Sym | NC64A/Sym | Apo/Sym | NC64A/Sym | |||
| NPNHRC_26859 | 83.2 | 9.7 | ∞ | ∞ | (Hydra viridis specific) | |
| RC_FVQRUGK01AXSJ | 13.7 | 2.6 | 2.1 | 1.5 | acetoacetyl-CoA synthetase | |
| rc_14793 | 7.2 | 4.1 | 9.4 | 4.8 | 2-isopropylmalate synthase | IPR013785 Aldolase_TIM, |
| FV81RT002HT2FL | 2.8 | 2.0 | 3.1 | 1.8 | histidine ammonia-lyase | IPR001106 Aromatic_Lyase IPR008948 L-Aspartase-like |
| NPNHRC_12201 | 2.7glutamate | 2.3 | 2.6 | 2.5 | (Hydra viridis specific) | |