Table 2.
Gene Name |
CpG site | N† | Mean | Median | SD‡ | Interquartile Range |
Range |
---|---|---|---|---|---|---|---|
IGF2AS | 5 | 157 | 0.47 | 0.58 | 0.32 | 0.57 | (0.00, 0.96) |
| |||||||
Kv | |||||||
DMR§ | 144 | 0.30 | 0.29 | 0.05 | 0.07 | (0.16, 0.42) | |
|
|||||||
1 | 143 | 0.25 | 0.26 | 0.06 | 0.07 | (0.12, 0.39) | |
6 | 144 | 0.25 | 0.26 | 0.06 | 0.08 | (0.08, 0.41) | |
8,9 | 144 | 0.27 | 0.27 | 0.05 | 0.07 | (0.03, 0.40) | |
10,11,12 | 142 | 0.23 | 0.23 | 0.06 | 0.07 | (0.03, 0.38) | |
15 | 144 | 0.30 | 0.31 | 0.06 | 0.08 | (0.14, 0.43) | |
17,18 | 144 | 0.30 | 0.31 | 0.05 | 0.07 | (0.14, 0.49) | |
20 | 144 | 0.31 | 0.31 | 0.06 | 0.06 | (0.10, 0.47) | |
21 | 144 | 0.30 | 0.30 | 0.06 | 0.05 | (0.12, 0.47) | |
22 | 144 | 0.24 | 0.24 | 0.04 | 0.04 | (0.12, 0.43) | |
24 | 144 | 0.29 | 0.30 | 0.08 | 0.10 | (0.11, 0.44) | |
26,27 | 144 | 0.55 | 0.55 | 0.06 | 0.07 | (0.35, 0.70) | |
| |||||||
MEG3‖ | |||||||
DMR§ | 152 | 0.49 | 0.52 | 0.11 | 0.19 | (0.26, 0.82) | |
|
|||||||
3 | 152 | 0.57 | 0.59 | 0.16 | 0.17 | (0.11, 1.00) | |
6 | 150 | 0.54 | 0.54 | 0.09 | 0.28 | (0.31, 0.96) | |
15 | 152 | 0.40 | 0.39 | 0.10 | 0.14 | (0.00, 0.80) | |
16 | 150 | 0.38 | 0.38 | 0.10 | 0.15 | (0.00, 0.82) | |
20,21 | 150 | 0.43 | 0.42 | 0.09 | 0.14 | (0.05, 0.75) | |
22 | 150 | 0.54 | 0.54 | 0.09 | 0.17 | (0.31, 0.96) | |
23 | 152 | 0.46 | 0.46 | 0.10 | 0.14 | (0.21, 0.95) | |
26,27,28 | 152 | 0.55 | 0.55 | 0.11 | 0.21 | (0.03, 0.89) | |
29,30,31 | 152 | 0.57 | 0.56 | 0.12 | 0.19 | (0.12, 1.00) | |
| |||||||
PEG10 | |||||||
DMR§ | 140 | 0.30 | 0.32 | 0.08 | 0.07 | (0.00, 0.45) | |
|
|||||||
5 | 137 | 0.31 | 0.32 | 0.10 | 0.07 | (0.02, 0.83) | |
6 | 138 | 0.26 | 0.27 | 0.12 | 0.14 | (0.00, 0.47) | |
7 | 139 | 0.32 | 0.34 | 0.10 | 0.07 | (0.00, 0.85) |
CIN = Cervical Intraepithelial Neoplasia; CINCS = Cervical Intraepithelial Neoplasia Cohort Study
Numbers do not add up to the total sample size due to missing data
SD = Standard Deviation
DMR = Differentially methylated region; Median across all CpG loci for candidate gene
MEG3 intronic differentially methylated region