Table 3.
General linear model analysis for body size
| ECA | Gene | Polymorphism | R-Square | F-value | P-value | Genotype | LSMean (height, cm) | Standard error |
|---|---|---|---|---|---|---|---|---|
| 1 | ADAMTS17 | NC_009144.2:g.105258161C > A | 0.34 | 61.51 | 2.7089E-22 | A/A | 91.27 | 0.68 |
| C/A | 100.39 | 1.26 | ||||||
| C/C | 107.14 | 1.41 | ||||||
| 6 | HMGA2 | c.83G > A | 0.12 | 18.81 | 1.47E-7 | G/G | 102.33 | 1.38 |
| G/A | 89.82 | 2.97 | ||||||
| A/A | 93.80 | 0.73 | ||||||
| 19 | OSTN | NC_009162.2:g.28594461G > A | 0.40 | 78.57 | 5.646E-27 | A/A | 90.36 | 0.66 |
| G/A | 102.99 | 1.11 | ||||||
| G/G | 105.17 | 1.36 | ||||||
| 11 | GH1 | NC_009154.2:g.15520392C > T | 0.22 | 33.91 | 1.0714E-13 | C/C | 98.64 | 0.72 |
| C/T | 90.22 | 1.26 | ||||||
| T/T | 84.90 | 1.89 |
The genotype effects on height at the withers are shown for all four SNV/SNPs validated in 243 Shetland ponies and related breeds whose height at the withers was measured