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. 2018 Jun 27;38(3):BSR20180072. doi: 10.1042/BSR20180072

Table 2. Genotype frequency distributions of DROSHA and DGCR8 SNPs in included studies.

Ref. No. Year Cancer type Gene SNPs1 Sample size Case Control PHWE MAF in controls (Global MAF4) Included in meta-analysis
Case Control Homozygote wild Heterozygote Homozygote variant Homozygote wild Heterozygote Homozygote variant
1 2010 Lung cancer DROSHA rs6877842 93 93 81 11 1 84 8 1 0.136 0.054 (0.138) Yes
(G > C)
Lung cancer DROSHA rs10719 97 97 59 29 9 52 38 7 0.987 0.268 (0.483) Yes
(T > C)
Lung cancer DGCR8 rs3757 94 90 60 27 7 60 24 6 0.114 0.200 (0.182) Yes
(G > A)
Lung cancer DGCR8 rs417309 98 97 90 8 0 88 9 0 0.632 0.046 (0.043) Yes
(G > A)
Lung cancer DGCR8 rs1640299 98 97 58 33 7 52 40 5 0.444 0.258 (0.381) Yes
(T > G)
2 2013 Breast cancer DROSHA rs10719 847 878 433 346 68 463 353 62 0.635 0.272 (0.483) Yes
(T > C)
Breast cancer DROSHA rs17409893 849 885 527 287 35 575 276 34 0.902 0.194 (0.222) No3
(A > G)
Breast cancer DROSHA rs2291109 858 886 552 273 33 535 306 45 0.884 0.223 (0.061) Yes
(A > T)
Breast cancer DROSHA rs642321 854 883 212 423 219 231 433 219 0.571 0.493 (0.322) Yes
(C > T)
Breast cancer DGCR8 rs1640299 849 891 465 330 54 476 357 58 0.412 0.265 (0.381) Yes
(T > G)
Breast cancer DGCR8 rs417309 860 893 771 89 0 826 67 0 0.244 0.038 (0.043) Yes
(G > A)
Breast cancer DGCR8 rs720012 867 891 225 425 217 240 451 200 0.668 0.478 (0.221) No3
(G > A)
Breast cancer DGCR8 rs720014 836 880 542 264 30 555 287 38 0.907 0.206 (0.183) No3
(T > C)
3 2013 Breast cancer DROSHA rs2291109 899 957 563 296 40 625 298 34 0.835 0.191 (0.061) Yes
(A > T)
Breast cancer DGCR8 rs417309 901 960 830 68 3 910 49 1 0.687 0.027 (0.043) Yes
(G > A)
4 2013 Bladder cancer DROSHA rs2291109 685 730 421 228 36 419 280 31 0.062 0.234 (0.061) Yes
(A > T)
Bladder cancer DROSHA rs10719 684 727 352 278 54 413 275 39 0.437 0.243 (0.483) Yes
(T > C)
Bladder cancer DROSHA rs642321 685 730 197 326 162 176 371 183 0.655 0.505 (0.322) Yes
(C > T)
5 2013 Renal cell carcinoma DROSHA rs10719 252 246 161 75 16 155 76 15 0.177 0.215 (0.483) Yes
(T > C)
Renal cell carcinoma DROSHA rs6877842 275 278 200 65 10 204 65 9 0.185 0.149 (0.138) Yes
(G > C)
Renal cell carcinoma DGCR8 rs3757 276 278 163 102 11 162 102 14 0.688 0.234 (0.182) Yes
(G > A)
Renal cell carcinoma DGCR8 rs417309 277 278 243 30 4 243 34 1 0.87 0.065 (0.043) Yes
(G > A)
Renal cell carcinoma DGCR8 rs1640299 277 278 61 151 65 75 136 67 0.729 0.486 (0.381) Yes
(T > G)
6 2015 Colorectal cancer DROSHA rs10719 408 400 224 154 30 211 168 21 0.09 0.263 (0.483) Yes
(T > C)
7 2015 Laryngeal cancer DROSHA rs6877842 128 170 73 49 6 76 79 15 0.384 0.321 (0.138) Yes
(G > C)
Laryngeal cancer DGCR8 rs417309 112 170 67 32 13 116 46 8 0.227 0.182 (0.043) Yes
(G > A)
Laryngeal cancer DGCR8 rs1640299 113 170 60 47 6 61 93 16 0.021 0.368 (0.381) No2
(T > G)
Laryngeal cancer DGCR8 rs3757 122 170 29 89 4 36 119 15 <0.001 0.438 (0.182) No2
(G > A)
8 2016 Laryngeal cancer DROSHA rs6877842 100 100 60 35 5 44 47 9 0.476 0.325 (0.138) Yes
(G > C)
Laryngeal cancer DGCR8 rs417309 100 100 60 28 12 69 27 4 0.516 0.175 (0.043) Yes
(G > A)
Laryngeal cancer DGCR8 rs1640299 100 100 52 42 6 36 55 9 0.062 0.365 (0.381) Yes
(T > G)
9 2016 Hepatocellular carcinoma DROSHA rs10719 147 209 81 53 13 110 88 11 0.215 0.263 (0.483) Yes
(T > C)
Hepatocellular carcinoma DROSHA rs6877842 147 209 138 9 0 200 9 0 0.75 0.022 (0.138) Yes
(G > C)
10 2017 Gastirc cancer DROSHA rs10719 628 502 314 257 57 248 205 49 0.487 0.302 (0.483) Yes
(T > C)

The results were in bold if P<0.05. Abbreviations: MAF, minor allele frequency; PHWE, the P-value for HWE in control groups.

1, The ancestral alleles were referenced in the NCBI database.

2, Excluded due to the SNP not being in accordance with HWE.

3, Excluded due to the limited number for this locus;

4, The global MAFs were referenced in the NCBI database.