Table 2.
Association test between the three eQTL hotspots that harbor TF in their region, and IMF content traits
| eQTL hotspots | rs135914685- hotspot 1(USF1) | rs110242967 - hotspot 2 (EGR4) | rs134095631 - hotspot 3 (RUNX1T1) | |||
|---|---|---|---|---|---|---|
| Traits | p-value | FDR1 | p-value | FDR | p-value | FDR |
| BFTa | 1.89E-06 | 7.47E-06i | 2.77E-06 | 8.30E-06i | 8.30E-06 | 2.07E-05i |
| IMFb(%) | 3.55E-02 | 6.61E-02 | 7.61E-02 | 8.15E-02 | 3.24E-02 | 3.74E-02i |
| Myristic (%) | 5.45E-04 | 2.30E-03i | 1.51E-05 | 2.84E-05i | 1.40E-05 | 2.63E-05i |
| Myristoleic (%) | 2.73E-05 | 1.14E-04i | 3.61E-04 | 5.41E-04i | 5.65E-04 | 7.71E-04i |
| Palmitic (%) | 5.37E-07 | 7.47E-06i | 5.34E-07 | 2.00E-06i | 5.55E-07 | 2.08E-06i |
| Palmitoleic (%) | 1.21E-05 | 5.45E-05i | 9.73E-06 | 2.09E-05i | 1.20E-05 | 2.58E-05i |
| Stearic (%) | 1.38E-01 | 1.89E-01 | 1.21E-01 | 1.21E-01 | 1.61E-01 | 1.61E-01 |
| Oleic (%) | 2.04E-14 | 5.17E-13i | 2.11E-14 | 1.06E-13i | 1.76E-14 | 8.82E-14i |
| Linoleic (%) | 2.74E-02 | 4.27E-02i | 3.65E-02 | 4.21E-02i | 4.22E-02 | 4.53E-02i |
| CLAc9t11c(%) | 2.20E-16 | 3.30E-15i | 2.20E-16 | 3.30E-15i | 2.20E-16 | 3.30E-15i |
| SFAd(%) | 4.78E-06 | 3.75E-05i | 4.62E-06 | 1.16E-05i | 4.09E-06 | 1.23E-05i |
| MUFAe(%) | 1.72E-05 | 8.81E-05i | 1.66E-04 | 2.76E-04i | 1.41E-04 | 2.35E-04i |
| PUFAf(%) | 3.09E-04 | 1.26E-03i | 4.03E-04 | 5.49E-04i | 4.03E-04 | 6.04E-04i |
| Sum_n3g(%) | 2.20E-16 | 3.30E-15i | 2.20E-16 | 1.65E-15i | 2.20E-16 | 1.65E-15i |
| Sum_n6h(%) | 1.24E-02 | 3.80E-02i | 1.10E-02 | 1.38E-02i | 9.68E-03 | 1.21E-02i |
aBackfat thickness
bintramuscular fat
cconjugated linoleic acid cis9 trans11
dsaturated fatty acid
emonounsaturated fatty acid
fpolyunsaturated fatty acid
gsum of omega-3, and
hsum of omega-6
iSignificant FDR 5%
1FDR – Adjusted p-value using the false discovery rate method by Benjamini and Hochberg 1995