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. 2018 Jun 19;5:132. doi: 10.3389/fvets.2018.00132

Table 1.

Primer conditions for the detection of astrovirus (AV), rotavirus C, and hepatitis E virus (HEV) in mink fecal samples.

Virus Primer names Primer sequence Product size (bp) Annealing temperature (°C) References
Mink astrovirus MA15 5′CAAATGCCTGGAAGAACAC-3′ 189 52 (17)
MA17 5′-GAGGAGTT TCAGACAGATG-3′
Rotavirus C RVC6-3F 5′-GTTGCATCCGTGAAGAGAATG-3′ 356 59.5 (8, 22)
C4 5′-AGCCACATAGTTCACATTTCATCC−3′
Mink hepatitis E virus HepE-fwd 5′-CCAGAATGGTGCTTCTATGGTGAT-3′ 261 60 (1)
HepE-rev 5′-AATTGTTCTGCGAGCTATCAAACTC-3′
Swine hepatitis E virus 3156NF 5′-AATTATGCYCAGTAYCGRGTTG-3′ 348 55
3157NR 5′- CCCTTRTCYTGCTGMGCATTCTC-3′
3158NF 5′-GTWATGCTYTGCATWCATGGCT-3′
3159NR 5′AGCCGACGAAATCAATTCTGTC-3′