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. 2018 Jan 10;19(3):175–184. doi: 10.2217/pgs-2017-0187

Table 1. . Variants identified from the literature previously associated with tacrolimus trough concentrations.

rs# Proxy SNP Gene Chrom. Position Common name Nucleotide Amino acid Ref.
rs11265572   NR1I3 1 1.61E + 08   g.161243273G>T Noncoding [6]

rs1800872   IL10 1 2.07E + 08 -592C>A c.-627A>C Noncoding [7,8]

rs1800871   IL10 1 2.07E + 08 -819C>T c.-854T>C Noncoding [7,8]

rs1800896   IL10 1 2.07E + 08 -1082G>A c.-1117A>G Noncoding [9]

rs4553808 rs16840252 CTLA4 2 2.04E + 08   c.-1661A>G Noncoding [10]

rs3814055   NR1I2 3 1.2E + 08 -25385T>C c.-1135C>T Noncoding [11,12]

rs6785049   NR1I2 3 1.2E + 08 7635A/G c.795-93G>A Noncoding [13]

rs2276707 rs3814057 NR1I2 3 1.2E + 08 8055C>T c.938-17C>T Noncoding [14]

rs181781 rs657075 IL3 5 1.32E + 08   c.-1285G>A Noncoding [10]

rs1800796 rs1524107 IL6 7 22726627   c.-636G>C Noncoding [15]

rs1057868   POR 7 75985688 *28 c.1508C>T p.Ala503Val [16–22]

rs1045642 rs2235048 ABCB1 7 87509329 3435C/T c.3435T>C p.Ile1145= [12,23–29]

rs2032582 rs4148738 ABCB1 7 87531302 2677G/T/A c.2677T/A/G p.Ser893Ala/Thr [12,24,27–30]

rs1128503   ABCB1 7 87550285 1236C/T c.1236T>C p.Gly412= [12,24,28–30]

rs2229109 rs117937072 ABCB1 7 87550493 1199G/A c.1199G>A p.Ser400Asn [30,31]

rs9282564   ABCB1 7 87600124 61A/G c.61A>G p.Asn21Asp [24]

rs3213619   ABCB1 7 87600877 -129T/C c.-129T>C Noncoding [13]

rs41303343   CYP3A5 7 99652770 *7 c.1035_1036insT p.Thr346Tyrfs [32,33]

rs10264272   CYP3A5 7 99665212 *6 c.624G>A p.Lys208= [32,33]

rs4646450   CYP3A5 7 99668695   c.319-1630C>T Noncoding [34]

rs776746   CYP3A5 7 99672916 *3 c.219-237A>G Noncoding [10–12,16,18,19,23,25,26,29,30,32,34–42]

rs2257401   CYP3A7 7 99709062 *2 c.1226C>G p.Thr409Arg [11]

rs2242480   CYP3A4 7 99763843 *1G c.1023 + 12G>A Noncoding [7,10–12,29]

rs28371759   CYP3A4 7 99764003 *18B c.875T>C p.Leu292Pro [43,44]

rs4646437   CYP3A4 7 99767460   c.671-205C>T Noncoding [7,10]

rs35599367   CYP3A4 7 99768693 *22 c.522-191C>T Noncoding [16,17,20,21,39,45–47]

rs2740574   CYP3A4 7 99784473 *1B c.-392G>A Noncoding [42,48–51]

rs1927907   TLR4 9 1.18E + 08   c.140 + 1757C>T Noncoding [52]

rs4986893   CYP2C19 10 94780653 *3 c.636G>A p.Trp212Ter [40]

rs4244285 rs12571421 CYP2C19 10 94781859 *2 c.681G>A p.Pro227= [37,40,53]

rs2273697   ABCC2 10 99804058 1249G>A c.1249G>A p.Val417Ile [42]

rs3740066   ABCC2 10 99844450 3972C>T c.3972C>T p.Ile1324= [42]

rs2070673   CYP2E1 10 1.34E + 08   c.-333A>T Noncoding [37]

rs2237991   ABCC8 11 17418682   c.2223-1720T>C Noncoding [54]

rs5744247   IL18 11 1.12E + 08   c.-8-372C>G Noncoding [38]

rs1946518 rs1946519 IL18 11 1.12E + 08 A-607C c.-838A>C Noncoding [41]

rs4149117   SLCO1B3 12 20858546 T334G c.335C>A p.Ser112Ala [55]

rs7311358   SLCO1B3 12 20862826 G699A c.699G>A p.Met233Ile [55]

rs2306283   SLCO2B1 12 21176804 A388G c.388A>G p.Asn130Asp [30]

rs4149056   SLCO2B1 12 21178615 T521C c.521T>C p.Val174Ala [30]

rs3745274   CYP2B6 19 41006936 *6 c.516G>T p.Gln172His [37]

rs2239393   COMT 22 19962905   c.289 + 90A>G Noncoding [56]

rs4823613 rs4253730 PPARA 22 46202410   c.208 + 3819A>G Noncoding [19]

rs4253728 rs4253730 PPARA 22 46214170   c.209-1003G>A Noncoding [19,46]

SNP was used as a proxy when a variant was not present in the genotyping chip.