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. 2001 Oct 15;29(20):4106–4113. doi: 10.1093/nar/29.20.4106

Figure 2.

Figure 2

Amino acid alignment of CA-like domains of chromodomain-containing LTR retrotransposons. The bottom block includes authentic CA domains from several gammaretrovirses. Coloring was generated by Clustal X using default values. Accession numbers for the elements in protein databases are as follows: Cgret, AAG24791; Skippy, AAA88790; CfT-1, CAA77890; MarY1, BAA78624; REAL, BAA89271; MAGGY, AAA33419; RETRO, AAD13304; Sushi, AAC33525; KIAA1051, AB028974; Moloney murine leukemia virus (MoMLV), AAB59942; feline leukemia virus (FeLV), AAA43054; baboon endogenous retrovirus (BaEV), BAA00923. Nucleotide accession numbers for the elements which were conceptually translated from their DNA sequences are as follows: Del1, X13886; RIRE3, AB014738; Legolas, AC006570; Gimli, AL049655; human endogenous retrovirus (HERV-E), M10976.