Table 2.

Prediction performance, memory usage and running time of pairwiseMKL and KronRLS-MKL methods in the task of drug response in cancer cell line prediction.

Anticancer drug response prediction	RMSE	rPearson	F1 score	Memory (GB)	Time (h)
pairwiseMKL	1.682	0.858	0.630	0.057	1.45
KronRLS-MKL	1.899	0.849	0.378	3.890	8.42

Performance measures were averaged over 10 outer CV folds. F1 score was calculated using the threshold of ln(IC₅₀) = 5 nM.