Table 1:
Respective number of genomes recovered from CAMI's high-complexity dataset with less than 10% and 5% contamination and more than 50%, 70%, and 90% completeness.
| Genome binner (% contamination) |
Predicted bins (% completeness) |
|||
|---|---|---|---|---|
| >50% | >70% | >90% | ||
| Gold standard | 596 | 596 | 596 | |
| CONCOCT (CAMI) | <10% | 129 | 129 | 123 |
| <5% | 124 | 124 | 118 | |
| MaxBin 2.0.2 (CAMI) | <10% | 277 | 274 | 244 |
| <5% | 254 | 252 | 224 | |
| MaxBin 2.2.4 | <10% | 274 | 271 | 236 |
| <5% | 249 | 247 | 216 | |
| MetaBAT (CAMI) | <10% | 173 | 152 | 126 |
| <5% | 159 | 140 | 118 | |
| MetaBAT 2.11.2 | <10% | 427 | 417 | 361 |
| <5% | 414 | 404 | 353 | |
| Metawatt 3.5 (CAMI) | <10% | 408 | 387 | 338 |
| <5% | 396 | 376 | 330 | |
| MyCC (CAMI) | <10% | 189 | 182 | 145 |
| <5% | 166 | 159 | 127 | |
| Binsanity 0.2.5.9 | <10% | 9 | 9 | 9 |
| <5% | 6 | 6 | 6 | |
| Binsanity-refine 0.2.5.9 | <10% | 206 | 204 | 192 |
| <5% | 183 | 181 | 171 | |
| COCACOLA | <10% | 88 | 87 | 75 |
| <5% | 69 | 69 | 60 | |
| DAS Tool 1.1 | <10% | 465 | 462 | 405 |
| <5% | 428 | 425 | 376 | |
In bold are the highest number of recovered genomes for a certain level of completeness (column) and contamination (row).