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. 2018 Jun 27;34(13):i254–i262. doi: 10.1093/bioinformatics/bty275

Table 1.

Notations of variables

L Maximum length among all sequences
charset {A, C, D, E, F, G, H, I, K, L, M, N, P, Q, R, S, T, V, W, Y, X}
C Size of charset = 21
N data Number of sequences
Nlabel Number of families
labelset Set of families
Nflt Number of convolution units
Nhdn Number of hidden units on fully connected layer
mk Length of kth convolution kernel