Table 2.
Statistics regarding aliFreeFold and the sub-optimal structures generated by RNAsubopt (Lorenz et al., 2011) on the dataset of 30 families
| Proportion of predictions having 80% or more correct bp. | 70% |
| Proportion of predictions having 70% or more correct bp. | 76% |
| Avg. prop. of sub-opt. structures having at least 80% correct bp. | 34% ± 26 |
| Avg. percentage of correct bp. of the best sub-optimal structuresa | 97% ± 10 |
a
The best sub-optimal structure is a structure from a set of sub-optimal structures maximizing the number of correct base pairs.