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. 2018 Jun 28;13(6):e0199902. doi: 10.1371/journal.pone.0199902

Table 1. Description of the seven largest physical P450 clusters in the V. vinifera genome.

Label Chr Location Total seq. Complete genes Expressed seq. Co-expression Organization
65 15 15572751..
15909327
20 CYP76
4 CYP704
10 20 Flowers and constitutive Low similarity among members
71 16 401789..
596606
16 CYP89 11 14 All leaves Single gene duplications
92 18 9625486..
9912876
22 CYP82
1 CYP74
1 CYP704
14 16 Powdery mildew infection and ripe berries Duplicated blocks with co-expression; some single gene duplications
138 3 4387722..
4512089
22 CYP82 5 16 Young berries Small duplicated blocks, a few are co-expressed, single gene duplications
171 6 16790972..
17446396
21 CYP75
14 CYP79
8 28 All leaves and powdery mildew infection Single gene duplications
182 7 22260680..
22372250
20 CYP81 9 15 Berries Small duplicated blocks, a few are co-expressed, single gene duplications
190 8 18038159..
18121816
11 CYP76 7 9 Flowers Duplicated blocks with co-expression; some single gene duplication

Label—sequential number of each cluster in the genome; Chr—chromosome number; Location—chromosome coordinates; Total seq.—number of P450 sequences in each cluster, including complete and partial genes, putative pseudogenes and pseudogenes with their family distribution; Complete genes—number of complete P450 genes in the cluster; Expressed sequences—number of expressed P450 sequences in the cluster, co-expression—expression pattern of the cluster; Organization—description of structural organization and mechanism of formation of each cluster.