Table 11.

In each of the 11 experiments, 20 top-ranked significant terms in GeneSigDB whose set of associated genes significantly overlapped with the set of genes selected for each experiment were identified.

			(i)		(ii)		(iii)		(iv)
Exp.	#1	#2	OL	adj. P-Value	OL	adj. P-Value	OL	adj. P-Value	OL	adj. P-Value
1	232	154	97/1548	$7.60\times {10}^{44}$	36/663	$1.68\times {10}^{12}$	77/2585	$1.72\times {10}^{13}$	36/238	$6.63\times {10}^{27}$
2	711	194	152/1548	$4.03\times {10}^{29}$	72/663	$3.28\times {10}^{15}$	222/2585	$8.96\times {10}^{36}$	44/238	$3.05\times {10}^{17}$
3	747	285	149/1548	$4.32\times {10}^{25}$	87/663	$1.58\times {10}^{22}$	222/2585	$4.01\times {10}^{32}$	30/238	$2.05\times {10}^7$
4	441	106	146/1548	$7.43\times {10}^{52}$	62/663	$6.57\times {10}^{20}$	145/2585	$1.51\times {10}^{25}$	46/238	$2.15\times {10}^{27}$
5	123	183	44/1548	$4.46\times {10}^{16}$	13/663	$1.84\times {10}^3$	37/2585	$1.34\times {10}^5$	24/238	$1.54\times {10}^{19}$
6	292	106	103/1548	$1.21\times {10}^{38}$	36/663	$1.79\times {10}^9$	94/2585	$1.51\times {10}^{15}$	39/238	$5.50\times {10}^{27}$
7	246	95	81/1548	$5.23\times {10}^{28}$	30/663	$1.34\times {10}^7$	66/2585	$3.88\times {10}^7$	30/238	$2.86\times {10}^{19}$
8	873	269	256/1548	$1.82\times {10}^{81}$	100/663	$8.26\times {10}^{26}$	229/2585	$4.03\times {10}^{25}$	86/238	$7.47\times {10}^{53}$
9	119	93	60/1548	$6.98\times {10}^{34}$	30/663	$9.55\times {10}^{17}$	48/2585	$9.73\times {10}^{13}$	22/238	$4.26\times {10}^{18}$
10	104	77	52/1548	$1.67\times {10}^{27}$	25/663	$1.59\times {10}^{12}$	45/2585	$4.60\times {10}^{12}$	15/238	$2.49\times {10}^{10}$
11	120	68	36/1548	$6.11\times {10}^{10}$	17/663	$4.25\times {10}^5$	40/2585	$1.07\times {10}^6$	13/238	$6.73\times {10}^7$

(i) A multiclass predictor based on a probabilistic model, i.e., application to gene expression profiling-based diagnosis of thyroid tumors; (ii) A redox signature score identifies diffuse large B-cell lymphoma patients with a poor prognosis; (iii) A comparison of the gene expression profile of undifferentiated human embryonic stem cell lines and differentiating embryoid bodies; and (iv) A gene expression profile of rat left ventricles reveals persisting changes after a chronic mild-exercise protocol: implications for cardioprotection. #1: genes; #2: terms. OL: overlaps (the number of genes coinciding with the genes selected for each experiment)/(genes listed in Enrichr in each category).