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. 2018 Jun 19;114(12):2799–2810. doi: 10.1016/j.bpj.2018.04.027

Figure 1.

Figure 1

ϕ-ψ free-energy map. For illustrative purposes, a two-dimensional histogram of ϕ,ψ dihedral angles was constructed across all residues from an MD trajectory of Gly15. The histogram was converted to a free-energy map relative to the most populated bin. Regions with values greater than 3.5 kcal/mol are colored white. The map is partitioned into six regions that are used to define a conformational state of oligoglycine. States 2, 3, 4, 5, and 6 correspond to the β, ppIIR, ppIIL, αR, and αL regions, respectively. State 1 corresponds to a high-energy region (Hi).