Table 4.
Chestnut domestication locus | Aligned proteinsa: Apple | Aligned proteins: Peach | Aligned proteins: Grape |
---|---|---|---|
LGA:50030000 | 0 | 0 | 3 |
LGA:65859000 | 1 | 0 | 3 |
LGB:19610000 | 1 | 0 | 0 |
LGC: 6505000 | 1 | 1 | 1 |
LGC: 30360000 | 2 | 0 | 0 |
LGD: 5350000 | 9 | 1 | 0 |
LGE: 25481000 | 0 | 2 | 0 |
LGF: 27956000 | 2 | 0 | 0 |
LGI:27225000 | 1 | 2 | 0 |
LGI:33385000 | 3 | 0 | 0 |
LGL:23280000 | 2 | 0 | 3 |
Number of predicted proteins from a domestication region in apple, peach, or grape that were the best alignment for a protein in the indicated chestnut selective sweep region in chestnut, in an alignment of all chestnut proteins vs. all apple, peach, and grape proteins.