Table 2. List of genomic resources provided with this manuscript and available at the dyrad repository https://doi.org/10.5061/dryad.59q56g6.
| Type | Name |
|---|---|
| Text file giving the position of 1,597 loci on the Pundamilia linkage map and the respective positions on Pundamilia and Oreochromis references | P_cross.MarkerPositions.txt |
| Fasta file of the improved Pundamilia reference genome (v2.0) | P_nyererei_v2.fasta.gz |
| Chain files to convert position between original (v1.0) and new reference (v2.0) | P_nyererei_v1.To.P_nyererei_v2.chain, P_nyererei_v2.To.P_nyererei_v1.chain |
| Annotation file matching reference v2.0 position with the NCBI annotation release 101 | P_nyererei_v2.gff.gz |
| Text file giving the extrapolated recombination rates along Pundamilia reference genome | P_nyererei_v2.RecRates.txt |