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. 2018 Jul 2;13(7):e0199916. doi: 10.1371/journal.pone.0199916

Table 2. List of gene-specific SYBR primers.

Gene Forward Reverse
Housekeeping gene
18S 5’-AGTCCCTGCCCTTTGTACACA-3’ 5’-CGATCCGAGGGCCTCACTA-3’
Fibrogenic genes
Collagen α1(I) 5’-TAGGCCATTGTGTATGCAGC-3’ 5’-ACATGTTCAGCTTTGTGGACC-3’
Collagen α1(IV) 5’-CACATTTTCCACAGCCAGAG-3’ 5’-GTCTGGCTTCTGCTGCTCTT-3’
PAI-1 5’-GCCAGGGTTGCACTAAACAT-3’ 5’-GCCTCCTCATCCTGCCTAA-3’
TGFβ1 5’-GTGGAAATCAACGGGATCAG-3’ 5’-ACTTCCAACCCAGGTCCTTC-3’
TIMP1 5’-AGGTGGTCTCGTTGATTTCT-3’ 5’-GTAAGGCCTGTAGCTGTGCC-3’
α-SMA 5’-AAACAGGAATACGACGAAG-3’ 5’-CAGGAATGATTTGGAAAGGA-3’
Proinflammatory cytokines
TNFα 5’-AGGGTCTGGGCCATAGAACT-3’ 5’-CCACCACGCTCTTCTGTCTAC-3’
IL-1α 5’-CCAGAAGAAAATGAGGTCGG-3’ 5’-AGCGCTCAAGGAGAAGACC-3’
IL-1β 5’-GGTCAAAGGTTTGGAAGCAG-3’ 5’-TGTGAAATGCCACCTTTTGA-3’
MCP-1 5’-ATTGGGATCATCTTGCTGGT-3’ 5’-CCTGCTGTTCACAGTTGCC-3’
Inflammasome component
NLRP3 5’-AAGTAAGGCCGGAATTCACC-3’ 5’-AAAATGCCTTGGGAGACTCA-3’
Marker of inflammation (infiltration of inflammatory cells)
CD68 5’-ACCGCCATGTAGTCCAGGTA-3’ 5’-ATCCCCACCTGTCTCTCTCA-3’
F4/80 5’-CATAAGCTGGGCAAGTGGTA-3’ 5’-GGATGTACAGATGGGGGATG-3’
Markers of oxidative stress
CYP2E1 5’-AGGCTGTCAAGGAGGTGCTAC-3’ 5’-GTTTCCCCATTCCCCAGTC-3’
Nrf2 5’-TCTTCCATTTACGGAGACCCA-3’ 5’-GATTCACGCATAGGAGCACTG-3’
Nqo1 5’-TCAACTGGTTTACAGCATTGGC-3’ 5’-GCTTGGAGCAAAATAGAGTGGG-3’
Gstp1 5’-ACCCTGCTGTCCCAGAACC-3’ 5’-GCGAGCCACATAGGCAGAG-3’
Ketohexokinase (KHK) primers
KHK-A 5’-TTGCCGATTTTGTCCTGGAT-3’ 5’-CCTCGGTCTGAAGGACCACAT-3’
KHK-C 5’-TGGCAGAGCCAGGGAGAT-3’ 5’-ATCTGGCAGGTTCGTGTCGTA-3’