Table 3. Differential splicing events.
| Gene Name | Event name | Sum Comparisons (28 total) |
RE+FECD (percent spliced in) |
RE-FECD (percent spliced in) |
RE-Control (percent spliced in) |
|---|---|---|---|---|---|
| RE+ vs RE- splicing differences | |||||
| MBNL1 | chr3:152163071:152163328:+@chr3:152164493:152164546:+@chr3:152165409:152165562:+ | 28 | 0.86 | 0.40 | 0.39 |
| NUMA1 | chr11:71723941:71727306:-@chr11:71723447:71723488:-@chr11:71721832:71721900:- | 28 | 0.27 | 0.73 | 0.77 |
| PPFIBP1 | chr12:27829361:27829532:+@chr12:27829997:27830029:+@chr12:27832422:27832572:+ | 28 | 0.12 | 0.73 | 0.64 |
| INF2 | chr14:105180540:105181193:+@chr14:105181621:105181677:+@chr14:105185132:105185947:+ | 27 | 0.2 | 0.83 | 0.90 |
| SCARB1 | chr12:125270903:125271049:-@chr12:125267229:125267357:-@chr12:125262174:125263132:- | 27 | 0.27 | 0.76 | 0.75 |
| SYNE1 | chr6:152469180:152469513:-@chr6:152466622:152466690:-@chr6:152464758:152464900:- | 27 | 0.26 | 0.77 | 0.75 |
| ADD3 | chr10:111890121:111890244:+@chr10:111892063:111892158:+@chr10:111893084:111895323:+ | 26 | 0.39 | 0.05 | 0.05 |
| MBNL2 | chr13:97999058:97999321:+@chr13:98009050:98009103:+@chr13:98009736:98009889:+ | 26 | 0.60 | 0.03 | 0.06 |
| TTC7A | chr2:47183978:47184146:+@chr2:47185634:47185691:+@chr2:47202112:47202242:+ | 25 | 0.06 | 0.35 | 0.23 |
| ARVCF | chr22:19959409:19959494:-@chr22:19958739:19958858:-@chr22:19957402:19958266:- | 24 | 0.82 | 0.4 | 0.38 |
| TSPOAP1 | chr17:56387328:56387519:-@chr17:56385902:56386741:-@chr17:56385203:56385302:- | 24 | 0.24 | 0.93 | 0.93 |
| NDUFV3 | chr21:44317037:44317157:+@chr21:44323292:44324386:+@chr21:44328974:44329773:+ | 24 | 0.31 | 0.66 | 0.56 |
| APBB2 | chr4:40946882:40947087:-@chr4:40937094:40937156:-@chr4:40936631:40936716:- | 23 | 0.43 | 0.80 | 0.71 |
| IFI44 | chr1:79124997:79125168:+@chr1:79128389:79128563:+@chr1:79129450:79129763:+ | 23 | 0.61 | 0.90 | 0.82 |
| EXOC1 | chr4:56749989:56750094:+@chr4:56755054:56755098:+@chr4:56756389:56756552:+ | 22 | 0.81 | 0.39 | 0.16 |
| ITGA6 | chr2:173362703:173362828:+@chr2:173366500:173366629:+@chr2:173368819:173371181:+ | 22 | 0.18 | 0.68 | 0.69 |
| CLASP1 | chr2:122204913:122205083:-@chr2:122203025:122203072:-@chr2:122187649:122187753:- | 22 | 0.21 | 0.82 | 0.87 |
| COPZ2 | chr17:46105838:46105876:-@chr17:46105042:46105155:-@chr17:46103533:46103841:- | 21 | 0.35 | 0.05 | 0.10 |
| CD46 | chr1:207958964:207959027:+@chr1:207963598:207963690:+@chr1:207966864:207968861:+ | 20 | 0.30 | 0.54 | 0.60 |
| CADM1 | chr11:115080294:115080377:-@chr11:115069126:115069158:-@chr11:115049364:115049495:- | 18 | 0.26 | 0.03 | 0.03 |
| Found in FECD RE+ vs controls but not in RE+ vs RE- | |||||
| FGFR1 | chr8:38314874:38315052:-@chr8:38287200:38287466:-@chr8:38285864:38285953:- | 23 | 0.84 | 0.33 | 0.35 |
| VEGFA | chr6:43746626:43746655:+@chr6:43749693:43749824:+@chr6:43752278:43754223:+ | 19 | 0.78 | 0.58 | 0.5 |
| AKAP13 | chr15:86198648:86199018:+@chr15:86201768:86201821:+@chr15:86207794:86207986:+ | 19 | 0.53 | 0.82 | 0.76 |
| GOLGA2 | chr9:131036129:131036251:-@chr9:131035064:131035144:-@chr9:131030699:131030803:- | 18 | 0.09 | 0.35 | 0.44 |
| NHSL1 | chr6:138768138:138768330:-@chr6:138763120:138763251:-@chr6:138751530:138754817:- | 18 | 0.80 | 0.46 | 0.37 |
| KIF13A | chr6:17794480:17794626:-@chr6:17790103:17790141:-@chr6:17788007:17788106:- | 17 | 0.12 | 0.63 | 0.73 |
| PLEKHM2 | chr1:16046229:16046415:+@chr1:16047824:16047883:+@chr1:16051812:16052040:+ | 17 | 0.29 | 0.69 | 0.65 |
| MYO6 | chr6:76618213:76618344:+@chr6:76621389:76621415:+@chr6:76623780:76623998:+ | 15 | 0.11 | 0.32 | 0.41 |
| ABI1 | chr10:27065994:27066170:-@chr10:27060004:27060018:-@chr10:27059174:27059274:- | 13 | 0.38 | 0.83 | 0.8 |
| KIF13A | chr6:17772139:17772290:-@chr6:17771345:17771449:-@chr6:17763924:17765177:- | 12 | 0.47 | 0.19 | 0.18 |