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. Author manuscript; available in PMC: 2019 Jul 1.
Published in final edited form as: Alcohol Clin Exp Res. 2018 Jun 13;42(7):1177–1191. doi: 10.1111/acer.13763

Table 1. Genes comprising the orange3 candidate module for both alcohol clearance and acetate AUC.

The candidate module was identified based on eigengene association (nominal p-value < 0.01) with the phenotypes across the HXB/BXH panel and a maximum module eigengene quantitative trait locus that was both significant (genome-wide p-value < 0.01) and overlapped significant (genome-wide p-value < 0.05) or suggestive (genome-wide p-value < 0.63) phenotypic quantitative trait loci for the phenotypes in the HXB/BXH RI rat panel after 2 g/kg alcohol administration. Genes are ordered by intra-modular connectivity.

Associated Gene Name Chromosome Gene Starting Position (Mb) Type Description Intra-modular Connectivity
Adh4 2 243.70 Protein coding Alcohol dehydrogenase 4 (class II) 1.18
Adh1 2 243.55 Protein coding Alcohol dehydrogenase 1 (class I) 1.17
Hs2st1 2 250.47 Protein coding Heparan sulfate 2-O-sulfotransferase 1 1.14
Arl16 10 109.64 Protein coding ADP-ribosylation factor-like 16 1.13
Gbp5 2 248.18 Protein coding Guanylate binding protein 5 1.11
Camk2n1 5 156.88 Protein coding Calcium/calmodulin-dependent protein kinase II inhibitor 1 1.11
LOC685067 2 248.22 Protein coding Similar to guanylate binding protein family, member 6 1.10
Tmem79 2 187.70 Protein coding Transmembrane protein 79 1.08
Zfp143 1 174.70 Protein coding Zinc finger protein 143 1.07
Piwil2 15 52.04 Protein coding Piwi-like RNA-mediated gene silencing 2 1.05