Table 2.
Validation of RNAseq data by RT-qPCR analysis
ID | Gene | Description | Sodium gluconate | Oleic acid | ||||
---|---|---|---|---|---|---|---|---|
24 vs 41 h | Change | 24 vs 41 h | Change | |||||
RNAseq | RT | RNAseq | RT | |||||
PP_5003 | phaC1 | PHA polymerase | − 3.28 | − 4.19 | Down | 0.93 | 2.59 | Up |
PP_5004 | phaZ | PHA depolymerase | − 2.57 | − 3.99 | Down | 1.51 | 0.93 | Up |
PP_5005 | phaC2 | PHA polymerase | − 2.76 | − 3.21 | Down | 1.19 | 0.74 | Up |
PP_5006 | phaD | Transcriptional regulator | − 2.41 | − 3.14 | Down | 0.32 | 0.00 | Up |
PP_5007 | phaI | PHA granule-associated | − 5.15 | − 2.42 | Down | 2.63 | 0.14 | Up |
PP_5008 | phaF | PHA granule-associated | − 3.29 | − 3.69 | Down | 0.25 | 1.15 | Up |
PP_1408 | phaG | Acyl-transferase | − 4.85 | − 3.52 | Down | 2.48 | 2.28 | Up |
RT RT-qPCR data