Table 1.

New organelle editome entries added to the PREPACT reference library

Organelle Species	GenBank accession	RNA editing study	Editing sites
14 new chloroplast editomes
Aegilops tauschii	KJ614412	[41]	49
Amborella trichopoda	NC_005086	[40]	156
Apopellia endiviifolia	NC_019628	[49]	54
Cocos nucifera	NC_022417	[42]	98
Cucumis sativus	NC_007144	[43]	65
Equisetum hyemale	NC_020146	[50]	0
Ginkgo biloba	KP099648	[48]	263
Gossypium hirsutum	NC_007944	[44]	69
Ophioglossum californicum	NC_020147	[51]	232
Phalaenopsis aphrodite	NC_007499	[45]	47
Psilotum nudum	KC117179	[51]	30
Selaginella uncinata	AB197035	[36]	3488
Spirodela polyrhiza	NC_015891	[46]	74
Vigna radiata	AP014691	[47]	51
6 new mitochondrial editomes
Acrasis kona	NC_026286	[26]	2
Amborella trichopoda	KF754799 KF754800 KF754801 KF754802 KF754803	[54]	824
Cocos nucifera	NC_031696	[55]	794
Liriodendron tulipifera	KC821969	[53]	827
Ophioglossum californicum	NC_030900	[52]	861
Psilotum nudum	KX171638 KX171639	[52]	731

NCBI-curated accessions (NC_) have been used preferentially when RNA editing information was retained. Numbers of editing sites (last column) indicate “applied” events in the RNA editing annotation of the PREPACT references. Numbers are occasionally higher than in the respective studies since duplicate annotations had to be used where multiple identical gene copies exist, mainly for those located in the chloroplast IR regions. The Amborella trichopoda and Psilotum nudum mitochondrial editome references were assembled from the separate mt chromosome sequence entries in these species. The resulting number of editome references now available in PREPACT 3.0 totals 52 (27 chloroplast and 25 mitochondrial entries)