Table 15.
Peak of RAM usage in Megabytes of the tools on datasets of NA12878
| Chrom. | HapCHAT | HapCol | WhatsHap | WhatsHap | HapCUT2 | ReFHap | ProbHap | FastHare |
|---|---|---|---|---|---|---|---|---|
| cov. 15x | cov. 20x | |||||||
| 1 | 6361 | - | 2983 | 13259 | 3351 | - | - | 3050 |
| 2 | 7082 | - | 3173 | 13938 | 3362 | - | - | 3056 |
| 3 | 6180 | - | 2669 | 12672 | 3329 | - | - | 3041 |
| 4 | 7531 | - | 2685 | 12959 | 3334 | - | - | 3046 |
| 5 | 5882 | - | 2551 | 12364 | 3320 | - | - | 3033 |
| 6 | 5649 | - | 2325 | 12120 | 3312 | - | - | 3031 |
| 7 | 4597 | - | 2080 | 11167 | 3309 | - | - | 3022 |
| 8 | 5075 | - | 2091 | 11164 | 3302 | - | - | 3023 |
| 9 | 3583 | - | 1639 | 9345 | 3285 | 17915 | - | 3009 |
| 10 | 4059 | - | 1819 | 10164 | 3303 | 9766 | - | 3017 |
| 11 | 3965 | - | 1814 | 10135 | 3290 | 9632 | - | 3018 |
| 12 | 4011 | - | 1787 | 10229 | 3288 | 13984 | - | 3016 |
| 13 | 7950 | - | 1449 | 8982 | 3267 | 8371 | - | 3006 |
| 14 | 2857 | - | 1281 | 8198 | 3261 | 10024 | - | 2998 |
| 15 | 2232 | 8437 | 1077 | 7370 | 3257 | 8302 | - | 2993 |
| 16 | 3116 | 19698 | 1128 | 7703 | 3263 | 10328 | - | 2995 |
| 17 | 7844 | 7845 | 962 | 6737 | 3253 | 5941 | - | 2990 |
| 18 | 3542 | - | 1152 | 7810 | 3254 | 15868 | - | 2995 |
| 19 | 1721 | - | 793 | 6055 | 3244 | 8808 | - | 2983 |
| 20 | 8496 | 9966 | 865 | 6612 | 3242 | 7973 | - | 2985 |
| 21 | 1329 | - | 611 | 5211 | 3229 | 7852 | - | 2977 |
| 22 | 3324 | 7782 | 542 | 4912 | 3225 | 7904 | - | 2975 |
Each row corresponds to a chromosome. The dataset consists of all reads aligned to the chromosome. We report the results obtained by running the tools with maximum coverage 30 × for HapCHAT, 25 × for HapCol, 15 × and 20 × for WhatsHap. No maximum coverage was set for HapCUT2, ReFHap, ProbHap, and FastHare