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. Author manuscript; available in PMC: 2018 Jul 3.
Published in final edited form as: Med Image Anal. 2017 Oct 5;43:98–111. doi: 10.1016/j.media.2017.10.002

Table 4.

Evaluation results of the segmentation models trained using different numbers of training image patches (the sizes of image patches used to train FCNNs were 33*33*3 and 65*65*3 respectively, n = 5).

Dataset No. of patches Methods Dice PPV Sensitivity



Complete Core Enhancing Complete Core Enhancing Complete Core Enhancing
Challenge 1000*5*20 FCNNs 0.71 0.68 0.62 0.57 0.58 0.54 0.95 0.86 0.76
FCNN + CRF 0.84 0.78 0.68 0.84 0.78 0.61 0.85 0.81 0.79
FCNN + CRF + post-process 0.87 0.82 0.76 0.91 0.86 0.77 0.84 0.81 0.77
3000*5*20 FCNNs 0.73 0.70 0.66 0.60 0.61 0.59 0.94 0.86 0.76
FCNN + CRF 0.84 0.80 0.69 0.86 0.79 0.62 0.84 0.82 0.80
FCNN + CRF + post-process 0.86 0.83 0.77 0.92 0.86 0.77 0.83 0.82 0.77
5000*5*20 FCNNs 0.74 0.72 0.67 0.62 0.63 0.60 0.94 0.86 0.77
FCNN + CRF 0.85 0.80 0.70 0.87 0.80 0.63 0.84 0.81 0.80
FCNN + CRF + post-process 0.87 0.83 0.76 0.92 0.87 0.77 0.83 0.81 0.77
Learderboard 1000*5*20 FCNNs 0.66 0.58 0.51 0.53 0.53 0.45 0.96 0.74 0.67
FCNN + CRF 0.83 0.65 0.56 0.82 0.71 0.51 0.86 0.69 0.70
FCNN + CRF + post-process 0.86 0.72 0.61 0.88 0.76 0.63 0.85 0.77 0.68
3000*5*20 FCNNs 0.69 0.60 0.52 0.57 0.56 0.47 0.96 0.74 0.67
FCNN + CRF 0.83 0.65 0.56 0.84 0.70 0.49 0.85 0.69 0.71
FCNN + CRF + post-process 0.85 0.72 0.61 0.89 0.75 0.59 0.84 0.77 0.68
5000*5*20 FCNNs 0.70 0.61 0.54 0.58 0.57 0.49 0.96 0.74 0.67
FCNN + CRF 0.83 0.66 0.57 0.85 0.71 0.50 0.85 0.69 0.71
FCNN + CRF + post-process 0.86 0.73 0.62 0.89 0.76 0.64 0.84 0.78 0.68