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. Author manuscript; available in PMC: 2019 Jul 1.
Published in final edited form as: Cancer Prev Res (Phila). 2018 Apr 10;11(7):413–428. doi: 10.1158/1940-6207.CAPR-17-0308

Table 1. Up-regulated proteins and associated pathways: Comparison of response to calcium and Aquamin®.

Relative abundance (Average 1.8 fold-change or above relative to 0.15 mM calcium of 3 Adenomas)

Average FC (From 3 Adenomas)
A: Proteins Calcium Aquamin® Aquamin®
(1.5 mM) (0.15mM) (1.5mM)
Proteins common with all 3 Interventions; CA 1.5, AQ 0.15 & AQ 1.5 (2 common proteins)
None significant
Proteins common with 2 Interventions; AQ 0.15 & AQ 1.5 mM (1 common protein)
Merlin (NF2) 1.5±0.1* 1.9±0.3* 2.4±0.7*
Proteins common with 2 Interventions; CA 1.5 & AQ 1.5 mM (9 significant out of 15 common proteins)
Keratin-10 (KRT10) 2.0±0.4* 1.2±0.2 5.3±6.4
Keratin-2 (KRT2) 1.9±0.4* 1.0±0.1 4.6±5.4
Histone H1.5 (HIST1H1B) 1.9±0.4* 1.5±0.8 2.8±1.6
Histone H1.3 (HIST1H1D) 1.8±0.4* 1.5±0.8 2.7±1.5
60S ribosomal protein L7a (RPL7A) 1.8±0.3* 1.6±0.9 2.3±1.4
Histone H1.0 (H1F0) 1.8±0.4* 1.3±0.6 2.3±0.9
Chromatin target of PRMT1 protein (CHTOP) 1.9±0.2* 1.5±0.6 2.1±0.7
Olfactomedin-4 (OLFM4) 2.1±0.6* 1.0±0.0 2.0±0.6*
Brain acid soluble protein 1 (BASP1) 1.8±0.7 0.6±0.1 1.8±0.4*
Up-regulated Proteins; CA 1.5 mM (3 common proteins)
None significant
Up-regulated Proteins; AQ 0.15 mM (1 significant out of 5 common proteins)
ATP-dependent RNA helicase (DDX52) 1.6±0.1* 2.0±0.3* 1.6±0.2*
Up-regulated Proteins; AQ 1.5 mM (6 significant out of 17 common proteins)
keratin, type II cytoskeletal 5 (KRT5) 1.5±0.2* 1.1±0.3 5.8±6.6
Histone H1.2 (HIST1H1C) 1.7±0.3* 1.5±0.8 2.8±1.7
Histone H1.4 (HIST1H1E) 1.7±0.4* 1.1±0.4 2.0±0.6*
Ribonuclease P protein subunit p38 (RPP38) 1.3±0.1* 1.7±0.4* 1.9±0.7
60S ribosomal protein L14 (RPL14) 1.5±0.1* 1.4±0.6 1.8±0.8
Fatty acid-binding protein, liver (FABP1) 1.5±0.2* 1.1±0.0 1.8±0.4*
B. Significant Pathways (Reactome V63) Entities pValue
Activation of DNA fragmentation factor 1.4×10−11
Apoptosis induced DNA fragmentation 1.4×10−11
Formation of Senescence-Associated Heterochromatin Foci 3.9×10−11
Apoptotic execution phase 1.4×10−8
DNA Damage/Telomere Stress Induced Senescence 3.0×10−8
Cellular Senescence 3.9×10−6
Apoptosis 4.6×10−6
Programmed Cell Death 5.3×10−6
Major pathway of rRNA processing in the nucleolus and cytosol 1.5×10−4
rRNA processing in the nucleus and cytosol 1.9×10−4
rRNA processing 2.2×10−4
Cellular responses to stress 2.8×10−4
Cellular responses to external stimuli 6.3×10−4
Formation of the cornified envelope 9.6×10−4
Metabolism of RNA 2.8×10−3
Keratinization 4.2×10−3
Type I hemidesmosome assembly 0.02
RHO GTPases activate PAKs 0.03

Values represent average fold-change compared to control conditions (0.15 mM calcium) ±standard deviations. Only statistically significant proteins presented in table 1.

*

Represents significance in up-regulation as compared to the control at P < 0.05 level.