Table 1. Up-regulated proteins and associated pathways: Comparison of response to calcium and Aquamin®.
Average FC (From 3 Adenomas) | |||
---|---|---|---|
A: Proteins | Calcium | Aquamin® | Aquamin® |
(1.5 mM) | (0.15mM) | (1.5mM) | |
Proteins common with all 3 Interventions; CA 1.5, AQ 0.15 & AQ 1.5 (2 common proteins) | |||
None significant | |||
Proteins common with 2 Interventions; AQ 0.15 & AQ 1.5 mM (1 common protein) | |||
Merlin (NF2) | 1.5±0.1* | 1.9±0.3* | 2.4±0.7* |
Proteins common with 2 Interventions; CA 1.5 & AQ 1.5 mM (9 significant out of 15 common proteins) | |||
Keratin-10 (KRT10) | 2.0±0.4* | 1.2±0.2 | 5.3±6.4 |
Keratin-2 (KRT2) | 1.9±0.4* | 1.0±0.1 | 4.6±5.4 |
Histone H1.5 (HIST1H1B) | 1.9±0.4* | 1.5±0.8 | 2.8±1.6 |
Histone H1.3 (HIST1H1D) | 1.8±0.4* | 1.5±0.8 | 2.7±1.5 |
60S ribosomal protein L7a (RPL7A) | 1.8±0.3* | 1.6±0.9 | 2.3±1.4 |
Histone H1.0 (H1F0) | 1.8±0.4* | 1.3±0.6 | 2.3±0.9 |
Chromatin target of PRMT1 protein (CHTOP) | 1.9±0.2* | 1.5±0.6 | 2.1±0.7 |
Olfactomedin-4 (OLFM4) | 2.1±0.6* | 1.0±0.0 | 2.0±0.6* |
Brain acid soluble protein 1 (BASP1) | 1.8±0.7 | 0.6±0.1 | 1.8±0.4* |
Up-regulated Proteins; CA 1.5 mM (3 common proteins) | |||
None significant | |||
Up-regulated Proteins; AQ 0.15 mM (1 significant out of 5 common proteins) | |||
ATP-dependent RNA helicase (DDX52) | 1.6±0.1* | 2.0±0.3* | 1.6±0.2* |
Up-regulated Proteins; AQ 1.5 mM (6 significant out of 17 common proteins) | |||
keratin, type II cytoskeletal 5 (KRT5) | 1.5±0.2* | 1.1±0.3 | 5.8±6.6 |
Histone H1.2 (HIST1H1C) | 1.7±0.3* | 1.5±0.8 | 2.8±1.7 |
Histone H1.4 (HIST1H1E) | 1.7±0.4* | 1.1±0.4 | 2.0±0.6* |
Ribonuclease P protein subunit p38 (RPP38) | 1.3±0.1* | 1.7±0.4* | 1.9±0.7 |
60S ribosomal protein L14 (RPL14) | 1.5±0.1* | 1.4±0.6 | 1.8±0.8 |
Fatty acid-binding protein, liver (FABP1) | 1.5±0.2* | 1.1±0.0 | 1.8±0.4* |
B. Significant Pathways (Reactome V63) | Entities pValue |
---|---|
Activation of DNA fragmentation factor | 1.4×10−11 |
Apoptosis induced DNA fragmentation | 1.4×10−11 |
Formation of Senescence-Associated Heterochromatin Foci | 3.9×10−11 |
Apoptotic execution phase | 1.4×10−8 |
DNA Damage/Telomere Stress Induced Senescence | 3.0×10−8 |
Cellular Senescence | 3.9×10−6 |
Apoptosis | 4.6×10−6 |
Programmed Cell Death | 5.3×10−6 |
Major pathway of rRNA processing in the nucleolus and cytosol | 1.5×10−4 |
rRNA processing in the nucleus and cytosol | 1.9×10−4 |
rRNA processing | 2.2×10−4 |
Cellular responses to stress | 2.8×10−4 |
Cellular responses to external stimuli | 6.3×10−4 |
Formation of the cornified envelope | 9.6×10−4 |
Metabolism of RNA | 2.8×10−3 |
Keratinization | 4.2×10−3 |
Type I hemidesmosome assembly | 0.02 |
RHO GTPases activate PAKs | 0.03 |
Values represent average fold-change compared to control conditions (0.15 mM calcium) ±standard deviations. Only statistically significant proteins presented in table 1.
Represents significance in up-regulation as compared to the control at P < 0.05 level.