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. 2018 May 14;46(Web Server issue):W338–W343. doi: 10.1093/nar/gky356

Figure 1.

Figure 1.

CABS-flex 2.0 pipeline. In the first modeling step, CABS-flex uses the CABS coarse-grained protein model as an efficient simulation engine (the CABS model design and applications have been recently reviewed (1)). Subsequently, a protein dynamics trajectory is clustered into 10 cluster medoids (a medoid is a representative model of a cluster whose average dissimilarity to all the models in the cluster is minimal), which are automatically reconstructed to all-atom representation.