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Comparison of query throughput. We first show query throughput for combined sequence search and annotation steps for PANNZER2, eggNOG-mapper, ARGOT2 and BLAST2GO. We also show separate speeds for the annotation and BLAST steps for ARGOT2 and BLAST2GO. Notice that PANNZER2 and eggNOG-mapper outperform even the annotation step in ARGOT2 and BLAST2GO.
