Table 2.
Gene/Element | Strand | Size (bp) | GC_Percent (%) | Amino Acids (aa) | Inferred Initiation Codon | Inferred Termination Codon | One Letter Code | Anti-Codon | Intergenic Nucleotide * (bp) |
---|---|---|---|---|---|---|---|---|---|
tRNA-Phe | H | 68–70 | 40.58–45.50 | F | GAA | 0–45 | |||
12S rRNA | H | 907–953 | 48.05–48.58 | 0 | |||||
tRNA-Val | H | 71–72 | 46.48–50.00 | V | TAC | 0 | |||
16S rRNA | H | 1696–1720 | 46.74–47.59 | 0 | |||||
tRNA-Leu | H | 74 | 44.59–48.65 | L | TAA | 0 | |||
ND1 | H | 975 | 48.00–49.13 | 324 | ATG, GTG | TAG, TAA | 4 | ||
tRNA-Ile | H | 70 | 42.86–51.43 | I | GAT | −1 | |||
tRNA-Gln | L | 71 | 43.66–46.48 | Q | TTG | −1 | |||
tRNA-Met | H | 69 | 39.13–44.93 | M | CAT | 0 | |||
ND2 | H | 1045–1046 | 47.90–50.72 | 348 | ATG | TA, T | 0 | ||
tRNA-Trp | H | 71 | 49.30–50.70 | W | TCA | 0–1 | |||
tRNA-Ala | L | 69 | 37.68–42.03 | A | TGC | 2 | |||
tRNA-Asn | L | 72–73 | 45.21–50.68 | N | GTT | 34–36 | |||
tRNA-Cys | L | 66 | 43.94–53.03 | C | GCA | 0 | |||
tRNA-Tyr | L | 70 | 45.71–50.00 | Y | GTA | 1 | |||
COXI | H | 1557 | 49.13–49.90 | 518 | ATG | AGA | −5 | ||
tRNA-Ser | L | 71 | 46.48–50.70 | S | TGA | 3 | |||
tRNA-Asp | H | 69 | 40.58–46.38 | D | GTC | 8 | |||
COXII | H | 687–691 | 44.69–45.59 | 228–230 | ATG | T, AGA | 0–5 | ||
tRNA-Lys | H | 74–75 | 46.67–50.00 | K | TTT | 1 | |||
ATP8 | H | 168 | 40.48–46.43 | 55 | ATG | TAA | (−10)–17 | ||
ATP6 | H | 657–684 | 47.79–49.12 | 218–227 | ATG, ATA, GTG | TA, TAA | 0–1 | ||
COXIII | H | 785–786 | 48.03–50.25 | 261 | ATG | TA, TAA | (−1)–0 | ||
tRNA-Gly | H | 71 | 35.21–36.62 | G | TCC | 0 | |||
ND3 | H | 349 | 50.14–52.44 | 116 | ATG | T | 0 | ||
tRNA-Arg | H | 69 | 36.23–37.68 | R | TCG | 0 | |||
ND4L | H | 297 | 49.83–53.20 | 98 | ATG | TAA | −7 | ||
ND4 | H | 1381 | 48.08–49.67 | 460 | ATG | T | 0 | ||
tRNA-His | H | 69–72 | 34.78–36.11 | H | GTG | (−1)–0 | |||
tRNA-Ser | H | 68–71 | 54.41–57.35 | S | GCT | 2–5 | |||
tRNA-Leu | H | 73 | 43.84–49.32 | L | TAG | 0–15 | |||
ND5 | H | 1824–1839 | 47.47–47.80 | 607–612 | ATG, ATC | TAA, TAG | −4 | ||
ND6 | L | 522 | 45.40–50.77 | 173 | ATG | TAA, TAG | 0–1 | ||
tRNA-Glu | L | 69 | 39.13–46.38 | E | TTC | 3–5 | |||
Cytb | H | 1137–1141 | 48.72–50.57 | 378–380 | ATG | T, TAA | 0 | ||
tRNA-Thr | H | 72 | 52.78–56.94 | T | TGT | 3–5 | |||
tRNA-Pro | L | 70 | 34.29–38.57 | P | TGG | 0 | |||
D-loop | H | 821–838 | 35.92–37.50 | 0 |
* As for the adjacent genes, positive number represented spaced, negative number indicated overlap and zero indicated continuous.