. 2018 Jul 5;13(2):107–132. doi: 10.3727/000000006783991872

TABLE 6.

SUMMARY OF MICROARRAY DATASETS COMPARISON

GenBank Accession No.	Description	Microarray Dataset
GenBank Accession No.	Description	256 Genes	Rat^*	Human^†	Human^‡	Mice^§	Marker^¶
AA859305	Tropomyosin isoform 6	↑				↑
AA875523	Similar to 17,000 Da myosin light chain (LOC362816), mRNA	↑				↑
AA892775	Lysozyme	↑				↑
AF001898	Aldehyde dehydrogenase family 1, member A1	↑				↑
AF023087	Early growth response 1	↑			↑	↑
AF083269	Actin related protein 2/3 complex, subunit 1B	↑				↑
AI072634	Keratin complex 1, acidic, gene 18	↑	↑
All69327	Tissue inhibitor of metalloproteinase 1	↑					↑
AI169370	Alpha-tubulin	↑	↑
AI231292	Cystatin C	↑	↑
J02962	Lectin, galactose binding, soluble 3	↑	↑
J05122	Benzodiazepin receptor	↑	↑			↑
L38615	Glutathione synthetase	↑				↑
M12156	Heterogeneous nuclear ribonucleoprotein A1	↑				↑
M12919	Aldolase A	↑				↑
M37584	H2A histone family, member Z	↑				↑
M58404	Thymosin, beta 10	↑	↑
M60921	B-cell translocation gene 2, antiproliferative	↑				↑
M63282	Activating transcription factor 3	↑			↑
S72594	Tissue inhibitor of metalloproteinase type 2	↑					↑
U60882	Heterogeneous nuclear ribonucleoproteins methyltransferase-like 2 (S. cerevisiae)	↑			↓
X02904	Glutathione S-transferase, pi 2	↑				↑
X07944	Rat ornithine decarboxylase gene (EC 4.1.1.17)	↑				↑
X54617	Myosin regulatory light chain	↑	↑			↑
X58465	Rat mRNA for ribosomal protein S5	↑				↑
X61654	CD63 antigen	↑				↑
X62322	Granulin	↑				↑
X70871	Cyclin Gl	↑			↓
AA799560	N-myc downstream-regulated gene 2	↓				↓
AA799645	FXYD domain-containing ion transport regulator 1	↓		↓		↓
AA892832	Fatty acid elongase 1	↓				↑
AF080468	Glucose-6-phosphatase, transport protein 1	↓	↓
AI013861	3-Hydroxyisobutyrate dehydrogenase	↓				↓
AI177004	3-Hydroxy-3-methylglutaryl-coenzyme A synthase 1	↓				↓
D00362	Esterase 2	↓				↑
D13921	Acetyl-coenzyme A acetyltransferase 1	↓		↓
D90109	Fatty acid Coenzyme A ligase, long chain 2	↓	↓
J02592	Glutathione S-transferase Yb subunit	↓				↓
J02791	Acetyl-coenzyme A dehydrogenase, medium chain	↓		↓		↓
M00002	Apolipoprotein A-IV	↓	↓
Ml 1670	Catalase	↓		↓
M12337	Phenylalanine hydroxylase	↓				↓
M16235	Lipase, hepatic	↓				↓
M26127	Cytochrome P450, la2	↓	↓
M33648	3-Hydroxy-3-methylglutaryl-coenzyme A synthase 2	↓				↑
M64755	Cysteine-sulfinate decarboxylase	↓				↓
M67465	Hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase	↓				↓
M77479	Solute carrier family 10, member 1	↓	↓	↓
M89945	Rat farnesyl diphosphate synthase gene, exons 1-8	↓				↓
S83279	Peroxisome proliferator-inducible gene	↓		↓
U17697	Cytochrome P450, subfamily 51	↓				↓
U94856	Paraoxonase 1	↓	↓			↓
X06150	Glycine methyltransferase	↓				↓
X12459	Arginosuccinate synthetase	↓	↓

↑: Upregulation to control; ↓: downregulation to control.

From Utsunomiya et al. (45).

^†

273 HCC-associated signatures. From Kim et al. (26).

^‡

283 Etiology-associated signatures. From Kim et al. (26).

^§

From White et al. (50).

^¶

From Friedman (13), Hayasaka and Sausho (19), and Iredale (23).