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. Author manuscript; available in PMC: 2019 Jul 1.
Published in final edited form as: Hepatology. 2018 May 9;68(1):127–140. doi: 10.1002/hep.29778

Figure 5. Transcriptomic patterns of HuH1, HuH7 and P1 based on 10X genomics single cell analysis.

Figure 5

(A) 2D visualization of (10X Genomics) data from 899 HuH1 cells, 2088 HuH7 cells and 860 freshly isolated primary HCC cells by t-SNE. (B) t-SNE plots showing expression and distribution of hepatic CSC related genes. (C) HCC associated genes. (D) stemness-associated genes or immune cell genes. For panels B–D, each cell was colored based on their normalized expression of indicated genes, i.e., a gradient of gray, yellow, and red indicating low to high expression.