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. 2018 Jul 5;15:47. doi: 10.1186/s12977-018-0426-1

Table 1.

Comparison of estimates and 95% confidence/credibility intervals for IUPMStats and IUPMBayes

Positives n IUPMStats IUPMBayes
Estimate Lower 95% Upper 95% Median Lower 95% Upper 95%
0 3 0.17* 0 0.75 0.34 0.05 1.10
1 16 0.29 0.04 2.06 0.61 0.15 1.68
2 28 0.69 0.17 2.85 1.04 0.36 2.41
3 37 1.39 0.41 4.72 1.36 0.52 2.87
4 16 Undefined 1.85 0.80 3.63

We summarized the results of each method on 100 simulations of 4 replicate wells with 106 cells each, where the true IUPM was set to 1.0 with five sequence variants of equal frequency (1:1:1:1:1). We obtained results for the IUPMStats method directly from the online calculator. Entries for IUPMBayes were averaged across replicate simulations for each number of positives. *IUPMStats uses a median posterior estimate instead of the maximum likelihood estimate (0) when none of the wells are positive