Table 5.
Clone numbers with different instance cut-offs.
| Subject | C1 | C2 | C3 | C4 | C5 | C10 |
|---|---|---|---|---|---|---|
| D207 | 136876 | 34441 | 12419 | 6,170 | 3,598 | 891 |
| D267 | 21717 | 9,174 | 2,770 | 944 | 373 | 30 |
| D275 | 15161 | 6,794 | 2,316 | 942 | 436 | 65 |
| D279 | 12405 | 5,706 | 2,010 | 804 | 378 | 34 |
| D287 | 9,111 | 5,910 | 3,669 | 2,047 | 1,195 | 98 |
| D301 | 8,861 | 5,310 | 1,969 | 849 | 434 | 90 |
| D302 | 14333 | 7,378 | 2,882 | 1,190 | 590 | 81 |
| D305 | 20225 | 7,823 | 2,505 | 754 | 260 | 7 |
| D309 | 17186 | 3,467 | 721 | 248 | 100 | 10 |
The numbers of clones that were amplified with FR1 + JH primers are shown for different clone size cut-offs in each of the donors. The clone size cut-offs are given in instances (the minimum number of replicates that contain at least one sequence from the clone). C1 (at least one instance) is equivalent to no cut-off and contains all clones irrespective of size. C2 is two or more instances, C3 is three or more instances, and so on.