Table 2.
TRAF7 Variants Detected in the Cohort
| Subjects 1–4 | Subject 5 | Subject 6 | Subject 7 | |
|---|---|---|---|---|
| DNA variant | c.1964G>A | c.1801A>G | c.1036A>G | c.1111C>G |
| Protein change | p.Arg655Gln | p.Thr601Ala | p.Lys346Glu | p.Arg371Gly |
| Genomic coordinate | chr16:2226351 | chr16:2226104 | chr16:2223505 | chr16:2223813 |
| Inheritance | de novoa | de novo | de novo | de novo |
| AA conservation | high | high | high | high |
| MutationTaster | disease-causing | disease-causing | disease-causing | disease-causing |
| SIFT | damaging | tolerated | damaging | damaging |
| PolyPhen-2 | probably damaging | probably damaging | benign | possibly damaging |
| Ubiquitination site | no | no | yes | no |
Nomenclature is based on transcript GenBank: NM_032271.2. hg19 genomic coordinates are used.
This variant was de novo in subjects 1–3, and was negative in the mother of subject 4 whose paternal sample was not available.