Table 1.

Common public Vγ9-JγP sequences can be generated by convergent recombination.

	Vγ9						P	N	P		JγP											P nt	N nt
Germline	TGT	GCC	TTG	TGG	GAG	GTG				T	GGG	CAA	GAG	TTG	GGC	AAA	AAA	ATC	AAG	GTA	TTT
CALWEVQELGKKIKVF
	TGT	GCC	TTG	TGG	GAG	GTG						CAA	GAG	TTG	GGC	AAA	AAA	ATC	AAG	GTA	TTT	0	0
	TGT	GCC	TTG	TGG	GAG	GT		C				CAA	GAG	TTG	GGC	AAA	AAA	ATC	AAG	GTA	TTT	0	1
	TGT	GCC	TTG	TGG	GAG	GT		A				CAA	GAG	TTG	GGC	AAA	AAA	ATC	AAG	GTA	TTT	0	1
	TGT	GCC	TTG	TGG	GAG	GT		T				CAA	GAG	TTG	GGC	AAA	AAA	ATC	AAG	GTA	TTT	0	1
	TGT	GCC	TTG	TGG	GAG	GTG	CA	G					GAG	TTG	GGC	AAA	AAA	ATC	AAG	GTA	TTT	2	1
CALWEVRELGKKIKVF
	TGT	GCC	TTG	TGG	GAG	GTG	C	G				A	GAG	TTG	GGC	AAA	AAA	ATC	AAG	GTA	TTT	1	1
	TGT	GCC	TTG	TGG	GAG	GTG		AG				A	GAG	TTG	GGC	AAA	AAA	ATC	AAG	GTA	TTT	0	2
	TGT	GCC	TTG	TGG	GAG	GTG	C	GT					GAG	TTG	GGC	AAA	AAA	ATC	AAG	GTA	TTT	1	2
	TGT	GCC	TTG	TGG	GAG	GTG	C	GC					GAG	TTG	GGC	AAA	AAA	ATC	AAG	GTA	TTT	1	2
	TGT	GCC	TTG	TGG	GAG	GTG	C	GG					GAG	TTG	GGC	AAA	AAA	ATC	AAG	GTA	TTT	1	2
CALWEAQELGKKIKVF
	TGT	GCC	TTG	TGG	GAG	G		CA				CAA	GAG	TTG	GGC	AAA	AAA	ATC	AAG	GTA	TTT	0	2
	TGT	GCC	TTG	TGG	GAG	G		CC				CAA	GAG	TTG	GGC	AAA	AAA	ATC	AAG	GTA	TTT	0	2
	TGT	GCC	TTG	TGG	GAG	G		CG				CAA	GAG	TTG	GGC	AAA	AAA	ATC	AAG	GTA	TTT	0	2
	TGT	GCC	TTG	TGG	GAG	G		CT				CAA	GAG	TTG	GGC	AAA	AAA	ATC	AAG	GTA	TTT	0	2
CALWEVLELGKKIKVF
	TGT	GCC	TTG	TGG	GAG	GTG	C	T				A	GAG	TTG	GGC	AAA	AAA	ATC	AAG	GTA	TTT	1	1
	TGT	GCC	TTG	TGG	GAG	GTG	C	TG					GAG	TTG	GGC	AAA	AAA	ATC	AAG	GTA	TTT	1	2
	TGT	GCC	TTG	TGG	GAG	GTG	C	TT					GAG	TTG	GGC	AAA	AAA	ATC	AAG	GTA	TTT	1	2
	TGT	GCC	TTG	TGG	GAG	GTG	C	TC					GAG	TTG	GGC	AAA	AAA	ATC	AAG	GTA	TTT	1	2
CALWEQELGKKIKVF
	TGT	GCC	TTG	TGG	GAG							CAA	GAG	TTG	GGC	AAA	AAA	ATC	AAG	GTA	TTT	0	0
	TGT	GCC	TTG	TGG	GA			A				CAA	GAG	TTG	GGC	AAA	AAA	ATC	AAG	GTA	TTT	0	1

Vγ9 and JγP gene segments are subject to nuclease activity, non-templated (N) nucleotide addition, and incorporation of palindromic (P) nucleotides, during recombination. Above are shown some of the possible different nucleotide sequences observed that generate the same CDR3 amino acid sequences, for five of the most common public Vγ9 sequences. N-nucleotides are shown in red and P-nucleotides are shown in blue.