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. 2018 Jul 2;9:932. doi: 10.3389/fpls.2018.00932

Figure 6.

Figure 6

Schematic representation of the distribution of mutations found in quasispecies of time-course infections of tomato yellow leaf curl Sardinia virus (TYLCSV), tomato yellow leaf curl virus (TYLCV) and tomato yellow leaf curl Malaga virus (TYLCMaV) in quasi-isogenic susceptible (ST, ty-1/ty-1) and resistant (RT, Ty-1/ty-1) tomato lines, common bean (CB) and Solanum nigrum (SN) at 15, 30, and 45 days after inoculation of single sequence variants. Sequenced regions of quasispecies molecular clones include 357 nts of the 5′-end of Rep, 200 nts of the 5′-end of C4 ORF, the IR, 187 nts of the 5′-end of the V2 ORF and the complete CP ORF. Nucleotide positions refer to the TYLCSV sequence [ES:Mur1:92] (Z25751) (Noris et al., 1994). Consensus sequences of the quasispecies were determined for whole viral genomic sequences. Mutations detected in separate quasispecies in the same host/time combination are indicated by the number of times they appeared. Mutations found in replicate samples are denoted with an asterisk.