FIGURE 6.

RNA-Seq differential gene expression analysis comparinganalysis comparing water deficit treatments non-inoculated against AMF-inoculated common bean roots (Myc–/Strss vs. Myc–/Strss). (A) Heat maps of all differentially expressed transcripts within biological replicates (p-value with FDR < 0.05). Heat maps based on individual Log₂ transformed normalized expression data. (B) Log₂ transformed relative expression data comparing the means of normalized counts retrieved for each DEG in both conditions. (C) Volcano plot; transcripts found to significantly up-/down-regulated (p-value with FDR < 0.05) are red colored dots.